guix_mirror_bot pushed a commit to branch python-team
in repository guix.
commit 07ad9d5ea5ba3477aa18b75e69dafd4023739a97
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Tue Dec 30 22:48:19 2025 +0000
gnu: htseq: Update to 2.0.9.
* gnu/packages/bioinformatics.scm (htseq): Update to 2.0.9.
[propagated-inputs]: Remove python-matplotlib.
[native-inputs]: Remove python-wheel; add python-matplotlib.
Change-Id: I026cd0ecf01418b4c112b8d0f2f6c0ab709c38d7
---
gnu/packages/bioinformatics.scm | 10 ++++------
1 file changed, 4 insertions(+), 6 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5783039925..0e23f579a0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8816,8 +8816,7 @@ HMMs).")
(define-public htseq
(package
(name "htseq")
- (version "2.0.2")
- ;; Sources on pypi do not include everything needed to run the tests.
+ (version "2.0.9")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -8826,19 +8825,18 @@ HMMs).")
(file-name (git-file-name name version))
(sha256
(base32
- "1kbr4ydjjhizz6r5m3xd4f0wj7qnn8zs0vnzghhgaa0yhbya5r19"))))
+ "1wyv5aqdx1i48i01xnav1cvv5zjv9n4nxplcgplwzxz9pxiw3kcb"))))
(build-system pyproject-build-system)
(propagated-inputs
- (list python-matplotlib
- python-numpy
+ (list python-numpy
python-pysam))
(native-inputs
(list python-cython
+ python-matplotlib
python-pandas
python-pytest
python-scipy
python-setuptools
- python-wheel
swig))
(home-page "https://github.com/htseq";)
(synopsis "Framework for analyzing high-throughput sequencing data")
