guix_mirror_bot pushed a commit to branch python-team
in repository guix.
commit 40498ce78f76b2b5e951f02feaaed5225b2e6792
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Sun Dec 14 23:08:33 2025 +0000
gnu: python-numdifftools: Update to 0.9.42.
* gnu/packages/python-science.scm (python-numdifftools): Update to 0.9.42.
[arguments] <test-flags>: Keep only exclusion markers.
<phases>: Remove 'relax-requirements; add 'fix-pytest-config.
[propagated-inputs]: Add python-matplotlib.
[native-inputs]: Remove python-setuptools, python-setuptools-scm, and
python-wheel; add python-pdm-backend.
Change-Id: I87bdd34812df8771f53dd2ab8cfc4634ffb0b07d
---
gnu/packages/python-science.scm | 37 ++++++++++++-------------------------
1 file changed, 12 insertions(+), 25 deletions(-)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index 47d12c3732..c395d90dd0 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -2040,49 +2040,36 @@ The supported distributions are:
(define-public python-numdifftools
(package
(name "python-numdifftools")
- (version "0.9.41")
+ (version "0.9.42")
(source
(origin
(method url-fetch)
(uri (pypi-uri "numdifftools" version))
(sha256
- (base32 "1d49wd5jqnl0500jyws0vb7nv4dy4bb5ml4z9qx1n8867k6hbxsf"))))
+ (base32 "1hgv3jhf4y9qrizkwfryj2b56zd0i2dvzig1y7r4ng193wbparl6"))))
(build-system pyproject-build-system)
(arguments
(list
+ ;; tests: 177 passed, 3 skipped, 2 deselected, 971 warnings
#:test-flags
- #~(list "--pyargs" "numdifftools"
- "-k" (string-join
- ;; Tests failing with error: TypeError: a must be an array
- ;; of real numbers, see
- ;; <https://github.com/pbrod/numdifftools/issues/72>.
- (list "not test_high_order_derivative"
- "test_low_order_derivative_on_example_functions"
- "test_sinx_div_x"
- "test_complex_hessian_issue_35"
-
- "numdifftools.fornberg.Taylor"
- "numdifftools.fornberg.derivative"
- "numdifftools.fornberg.taylor")
- " and not "))
+ #~(list "-m" "not benchmark and not slow")
#:phases
#~(modify-phases %standard-phases
- (add-after 'unpack 'relax-requirements
+ (add-after 'unpack 'fix-pytest-config
(lambda _
- (substitute* "setup.py"
- ;; We can run tests without deprecated pytest-runner.
- (("setup_requires.*") "")))))))
+ (substitute* "pyproject.toml"
+ ((" --cov=numdifftools --cov-report=xml") "")))))))
(native-inputs
(list python-algopy
python-line-profiler
+ python-pdm-backend
python-pytest
- python-setuptools
- python-setuptools-scm
- python-statsmodels
- python-wheel))
+ python-statsmodels))
(propagated-inputs
(list python-numpy
- python-scipy))
+ python-scipy
+ ;; [optional]
+ python-matplotlib))
(home-page "https://github.com/pbrod/numdifftools";)
(synopsis "Solves automatic numerical differentiation problems")
(description
