Hello Kei,

Kei Kebreau <kkebr...@posteo.net> writes:

[...]
>
> Here are two tentative patches that make the changes we've discussed.
> Also, should we make a deprecated-package definition for qtoctave?

I think some additional changes related to "(assoc-ref inputs ..."
needed to be made. Otherwise, looks good to me! Here is a patch I made
earlier but it was not tested, feel free to cherry-pick what is needed:

From 2b04caa66c17da257dfb4f4ccb94e8d629b95e53 Mon Sep 17 00:00:00 2001
From: Alex Vong <alexvong1...@gmail.com>
Date: Mon, 3 Dec 2018 03:39:40 +0800
Subject: [PATCH] gnu: Rename "octave" to "octave-cli" and "qtoctave" to
 "octave".

* gnu/packages/maths.scm (octave): Rename to octave-cli.
[name]: Change to "octave-cli".
(qtoctave): Rename to octave.
[name]: Change to "octave".
[inherit]: Inherit from octave-cli.
[source]: Likewise.
[inputs]: Likewise.
[native-inputs]: Likewise.
[arguments]: Likewise.
(flann): Update accordingly.
* gnu/packages/engineering.scm (qucs): Likewise.
(qucs-s): Likewise.
* gnu/packages/machine-learning.scm (shogun): Likewise.
---
 gnu/packages/engineering.scm      | 11 ++++++-----
 gnu/packages/machine-learning.scm |  3 ++-
 gnu/packages/maths.scm            | 21 +++++++++++----------
 3 files changed, 19 insertions(+), 16 deletions(-)

diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm
index 008035649..27a8dface 100644
--- a/gnu/packages/engineering.scm
+++ b/gnu/packages/engineering.scm
@@ -9,6 +9,7 @@
 ;;; Copyright © 2018 Tobias Geerinckx-Rice <m...@tobias.gr>
 ;;; Copyright © 2018 Clément Lassieur <clem...@lassieur.org>
 ;;; Copyright © 2018 Jonathan Brielmaier <jonathan.brielma...@web.de>
+;;; Copyright © 2018 Alex Vong <alexvong1...@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -1678,7 +1679,7 @@ parallel computing platforms.  It also supports serial execution.")
                    `("ASCOBINDIR" ":" prefix
                      (,(string-append (assoc-ref inputs "asco") "/bin")))
                    `("QUCS_OCTAVE" ":" prefix
-                     (,(string-append (assoc-ref inputs "octave") "/bin/octave")))))
+                     (,(string-append (assoc-ref inputs "octave-cli") "/bin/octave-cli")))))
                #t)))
          #:parallel-build? #f ; race condition
          #:configure-flags '("--disable-doc"))) ; we need octave-epstk
@@ -1702,7 +1703,7 @@ parallel computing platforms.  It also supports serial execution.")
          ("gcc-toolchain" ,gcc-toolchain)
          ("iverilog" ,iverilog)
          ("libtool" ,libtool)
-         ("octave" ,octave)
+         ("octave-cli" ,octave-cli)
          ("qt4" ,qt-4)
          ("sed" ,sed)))
       (home-page "http://qucs.sourceforge.net/";)
@@ -1816,8 +1817,8 @@ simulations are also supported.")
                                                                "/bin")))
                  `("ASCOBINDIR" ":" prefix (,(string-append (assoc-ref inputs "asco")
                                                             "/bin")))
-                 `("QUCS_OCTAVE" ":" prefix (,(string-append (assoc-ref inputs "octave")
-                                                             "/bin/octave"))))
+                 `("QUCS_OCTAVE" ":" prefix (,(string-append (assoc-ref inputs "octave-cli")
+                                                             "/bin/octave-cli"))))
                (symlink qucsator (string-append out "/bin/qucsator"))
                #t))))))
     (native-inputs
@@ -1832,7 +1833,7 @@ simulations are also supported.")
        ("libtool" ,libtool)
        ("mpi" ,openmpi)
        ("ngspice" ,ngspice)
-       ("octave" ,octave)
+       ("octave-cli" ,octave-cli)
        ("qt4" ,qt-4)
        ("qucs" ,qucs)
        ("sed" ,sed)
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index a7df9dce0..2af1cc02b 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -10,6 +10,7 @@
 ;;; Copyright © 2018 Fis Trivial <ybbs.da...@hotmail.com>
 ;;; Copyright © 2018 Julien Lepiller <jul...@lepiller.eu>
 ;;; Copyright © 2018 Björn Höfling <bjoern.hoefl...@bjoernhoefling.de>
+;;; Copyright © 2018 Alex Vong <alexvong1...@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -493,7 +494,7 @@ sample proximities between pairs of cases.")
      `(("python" ,python)
        ("numpy" ,python-numpy)
        ("r-minimal" ,r-minimal)
-       ("octave" ,octave)
+       ("octave-cli" ,octave-cli)
        ("swig" ,swig)
        ("eigen" ,eigen)
        ("hdf5" ,hdf5)
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 3dabef441..3cec75893 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -29,6 +29,7 @@
 ;;; Copyright © 2018 Marius Bakke <mba...@fastmail.com>
 ;;; Copyright © 2018 Eric Brown <br...@fastmail.com>
 ;;; Copyright © 2018 Julien Lepiller <jul...@lepiller.eu>
+;;; Copyright © 2018 Alex Vong <alexvong1...@gmail.com>
 ;;;
 ;;; This file is part of GNU Guix.
 ;;;
@@ -1413,9 +1414,9 @@ can solve two kinds of problems:
 
 ;; For a fully featured Octave, users are strongly recommended also to install
 ;; the following packages: less, ghostscript, gnuplot.
-(define-public octave
+(define-public octave-cli
   (package
-    (name "octave")
+    (name "octave-cli")
     (version "4.4.1")
     (source
      (origin
@@ -1497,21 +1498,21 @@ Work may be performed both at the interactive command-line as well as via
 script files.")
     (license license:gpl3+)))
 
-(define-public qtoctave
-  (package (inherit octave)
-    (name "qtoctave")
+(define-public octave
+  (package (inherit octave-cli)
+    (name "octave")
     (source (origin
-              (inherit (package-source octave))))
+              (inherit (package-source octave-cli))))
     (inputs
      `(("qscintilla" ,qscintilla)
        ("qt" ,qtbase)
-       ,@(package-inputs octave)))
+       ,@(package-inputs octave-cli)))
     (native-inputs
      `(("qttools" , qttools) ;for lrelease
        ("texlive" ,texlive) ;for texi2dvi
-       ,@(package-native-inputs octave)))
+       ,@(package-native-inputs octave-cli)))
     (arguments
-     (substitute-keyword-arguments (package-arguments octave)
+     (substitute-keyword-arguments (package-arguments octave-cli)
        ((#:phases phases)
         `(modify-phases ,phases
            (add-before 'configure 'patch-qscintilla-library-name
@@ -3577,7 +3578,7 @@ in finite element programs.")
      `(("unzip" ,unzip)))
     (inputs
      `(("hdf5" ,hdf5)
-       ("octave" ,octave)
+       ("octave-cli" ,octave-cli)
        ("python" ,python-2) ; print syntax
        ;; ("python2-numpy" ,python2-numpy) ; only required for the tests
        ("zlib" ,zlib)))
-- 
2.19.2

Cheers,
Alex

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