Good morning,

my question is the following. I have to calculate the roughness with its
error bar from images with 3 nm height islands on silicon oxide.
Unfortunately, also some crystals are present. They are quite height and
not properly scanned by the afm. The roughness I have to calculte should
not be referred to those crystals so I decided to use masks to get rid of
them.

My problem is that with masks I cannot get a roughness value with its
error bar. If I use in Gwyddion the option "Calculate row/column
statistical function" there is not the possibility "Exclude masked
region".

I can get the roughness from the other option "Statistical quantities" but
again no error bar.

How can I get a roughness value with error bar even if I have to use masks
to get rid of crystals?

Thank for the help

Stefano


Stefano Chiodini, PhD Student
Institute for Nanostructured Materials Studies (ISMN)
National Research Council (CNR)
Via Piero Gobetti 101
I-40129 Bologna
I T A L Y
Phone:++39-051-639-9188
Cell: ++39-3393142341
[email protected]
www.bo.ismn.cnr.it


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