Are you using CIFTI data? Is this the compiled version of matlab or the
interpreted version?
Peace,
Matt.
On 9/11/17, 4:19 PM, "hcp-users-boun...@humanconnectome.org on behalf of
Sang-Young Kim" <hcp-users-boun...@humanconnectome.org on behalf of
sykim...@gmail.com> wrote:
>Dear HCP experts:
>
>I¹m struggling with FIX for many days. The problem is that FIX does not
>generate cleaned data.
>So I found error message in .fix.log file as shown below.
>****************************************************************
>TR =
>
> 1
>
>Elapsed time is 2.053048 seconds.
>{?Error using file_array/permute (line 10)
>file_array objects can not be permuted.
>
>Error in read_gifti_file>gifti_Data (line 191)
> d = permute(reshape(d,fliplr(s.Dim)),length(s.Dim):-1:1);
>
>Error in read_gifti_file>gifti_DataArray (line 122)
> s(1).data = gifti_Data(t,c(i),s(1).attributes);
>
>Error in read_gifti_file (line 45)
> this.data{end+1} = gifti_DataArray(t,uid(i),filename);
>
>Error in gifti (line 74)
> this = read_gifti_file(varargin{1},giftistruct);
>
>Error in ciftiopen (line 16)
>cifti = gifti([tmpname '.gii']);
>
>Error in fix_3_clean (line 48)
> BO=ciftiopen('Atlas.dtseries.nii',WBC);
>}?
>**********************************************************************
>
>Actually I saw many posts with the same error. But no clear solution is
>provided. I believe I set the path correctly and use last version of
>GIFTI toolbox. And I have tested "ciftiopen" function directly on the
>matlab. It worked in matlab.
>But I have no idea why above error came up while running FIX.
>
>Any insights would be greatly appreciated.
>
>Thanks.
>
>Sang-Young Kim, Ph.D.
>
>Postdoctoral Fellow
>Department of Radiology, University of Pittsburgh
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