Yes, I’m using CIFTI data. This is the interpreted version. Sang-Young
> On Sep 11, 2017, at 5:59 PM, Glasser, Matthew <glass...@wustl.edu> wrote: > > Are you using CIFTI data? Is this the compiled version of matlab or the > interpreted version? > > Peace, > > Matt. > > On 9/11/17, 4:19 PM, "hcp-users-boun...@humanconnectome.org > <mailto:hcp-users-boun...@humanconnectome.org> on behalf of > Sang-Young Kim" <hcp-users-boun...@humanconnectome.org > <mailto:hcp-users-boun...@humanconnectome.org> on behalf of > sykim...@gmail.com <mailto:sykim...@gmail.com>> wrote: > >> Dear HCP experts: >> >> I¹m struggling with FIX for many days. The problem is that FIX does not >> generate cleaned data. >> So I found error message in .fix.log file as shown below. >> **************************************************************** >> TR = >> >> 1 >> >> Elapsed time is 2.053048 seconds. >> {?Error using file_array/permute (line 10) >> file_array objects can not be permuted. >> >> Error in read_gifti_file>gifti_Data (line 191) >> d = permute(reshape(d,fliplr(s.Dim)),length(s.Dim):-1:1); >> >> Error in read_gifti_file>gifti_DataArray (line 122) >> s(1).data = gifti_Data(t,c(i),s(1).attributes); >> >> Error in read_gifti_file (line 45) >> this.data{end+1} = gifti_DataArray(t,uid(i),filename); >> >> Error in gifti (line 74) >> this = read_gifti_file(varargin{1},giftistruct); >> >> Error in ciftiopen (line 16) >> cifti = gifti([tmpname '.gii']); >> >> Error in fix_3_clean (line 48) >> BO=ciftiopen('Atlas.dtseries.nii',WBC); >> }? >> ********************************************************************** >> >> Actually I saw many posts with the same error. But no clear solution is >> provided. I believe I set the path correctly and use last version of >> GIFTI toolbox. And I have tested "ciftiopen" function directly on the >> matlab. It worked in matlab. >> But I have no idea why above error came up while running FIX. >> >> Any insights would be greatly appreciated. >> >> Thanks. >> >> Sang-Young Kim, Ph.D. >> >> Postdoctoral Fellow >> Department of Radiology, University of Pittsburgh >> _______________________________________________ >> HCP-Users mailing list >> HCP-Users@humanconnectome.org <mailto:HCP-Users@humanconnectome.org> >> http://lists.humanconnectome.org/mailman/listinfo/hcp-users >> <http://lists.humanconnectome.org/mailman/listinfo/hcp-users> _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
