Also there is a -volume-reduce command if you want to do reduce operations on 
NIFTI volumes.

Peace,

Matt.

From: 
<hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>>
 on behalf of Timothy Coalson <tsc...@mst.edu<mailto:tsc...@mst.edu>>
Date: Monday, October 23, 2017 at 4:23 PM
To: hercp <he...@uw.edu<mailto:he...@uw.edu>>
Cc: HUMAN CONNECTOME 
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] (no subject)

rfMRI_REST1_LR_hp2000_clean.nii.gz is a volume file, not a cifti file.  Cifti 
files end in things like .dtseries.nii.  See wb_command -cifti-help:

https://www.humanconnectome.org/software/workbench-command/-cifti-help

Tim


On Mon, Oct 23, 2017 at 4:17 PM, hercp <he...@uw.edu<mailto:he...@uw.edu>> 
wrote:
I am running the command

wb_command -cifti-reduce rfMRI_REST1_LR_hp2000_clean.nii.gz MEAN 
mean.rfMRI_REST1_LR_hp2000_clean.nii.gz

and I get this error returned:

ERROR: no cifti extension found in file C:/rfMRI_REST1_LR_hp2000_clean.nii.gz

Am I missing a step?

Thanks for your help,
Heracles Panagiotides, PhD



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