Ekin, It looks like that for some reason Fortran compiler cannot write *.o file. Could it be that you ran out of space? Is there quota on your system? Was /tmp partition full?
I would try to run make check-install the second time, or go to /usr/local/hdf5-1.8.13/share/hdf5_examples/fortran and try to run the following command ../../../bin/h5fc -o h5_crtdat h5_crtdat.f90 and see if it works. Elena ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Elena Pourmal The HDF Group http://hdfgroup.org 1800 So. Oak St., Suite 203, Champaign IL 61820 217.531.6112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ On May 15, 2014, at 10:30 AM, Ekin Akoglu <[email protected]> wrote: > Dear Elena, > > The OS is 64-bit Debian Wheezy 7.5. The compiler is Intel Fortran Compiler > 2013 SP1 Update 3, which is exactly 14.0.3 20140422. My GCC version is 4.7.2. > I built and installed HDF5 as follows: > > $ ./configure --prefix=/usr/local/hdf5-1.8.13 --enable-fortran > --enable-fortran2003 > $ make > $ make check > # make install > $ make check-install > > Everything except the "make check-install" step worked flawlessly. > > Thank you. > > Kind regards, > > Ekin > > On 15 May 2014 17:11, Elena Pourmal <[email protected]> wrote: > Ekin, > > Could you please provide OS and compiler information? It would also help if > you post the outputs of the commands used to build and install the HDF5 > libraries. > > Thank you! > > Elena > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > Elena Pourmal The HDF Group http://hdfgroup.org > 1800 So. Oak St., Suite 203, Champaign IL 61820 > 217.531.6112 > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > > > > > On May 15, 2014, at 9:10 AM, Ekin Akoglu <[email protected]> wrote: > >> Dear all, >> >> I have just installed the HDF5 version 1.8.13 and the check-install process >> failed with: >> >> ============================ >> Testing run-fortran-ex.sh >> ============================ >> >> ################# h5_crtdat ################# >> error: can't open file h5_crtdat.o for write >> compilation aborted for h5_crtdat.f90 (code 1) >> messed up compiling h5_crtdat.f90 >> rm: cannot remove `*.o': No such file or directory >> rm: cannot remove `*.h5': No such file or directory >> >> make[3]: *** [installcheck-local] Error 1 >> make[3]: Leaving directory `/home/ekin/Tools/hdf5-1.8.13/fortran/examples' >> make[2]: *** [installcheck-local] Error 1 >> make[2]: Leaving directory `/home/ekin/Tools/hdf5-1.8.13/fortran' >> make[1]: *** [installcheck-recursive] Error 1 >> make[1]: Leaving directory `/home/ekin/Tools/hdf5-1.8.13/fortran' >> make: *** [installcheck-recursive] Error 1 >> >> Regards, >> >> Ekin >> >> On 15 May 2014 15:20, <[email protected]> wrote: >> >> >> To view from a browser see: >> http://www.hdfgroup.org/newsletters/newsletter140.html >> >> -------------------------------------------------------------------------- >> The HDF Group Home Page: http://www.hdfgroup.org/ >> Support Services: http://www.hdfgroup.org/services/ >> -------------------------------------------------------------------------- >> >> Newsletter #140 >> May 15, 2014 >> >> CONTENTS >> . Release of HDF5-1.8.13 >> >> - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - >> >> Release of HDF5 1.8.13 >> ====================== >> >> The HDF5-1.8.13 release is now available, and can be downloaded from the >> HDF Group Downloads page: >> >> http://www.hdfgroup.org/downloads/ >> >> It can also be obtained directly from: >> >> http://www.hdfgroup.org/HDF5/release/obtain5.html >> >> HDF5-1.8.13 is a minor release, with a few new features and changes. >> Important changes include: >> >> o The H5free_memory (C) api was added to free memory that was allocated >> by HDF5 API calls. This was added specifically for Windows, but may be >> useful anywhere that the library uses a different memory manager than >> the application. >> >> o New wrappers were added for C++ (many) and Fortran >> (h5pset_file_image_f and h5pget_file_image_f). >> >> o Mac OS X 10.9 Mavericks is now supported. >> >> o Many improvements were added in support of CMake, including the >> addition of support for CMake 2.8.11. >> >> o Improvements were added to the Core VFD (or Memory VFD). >> >> o The following changes were made to Parallel HDF5: >> >> - The MPI-POSIX VFD was removed. Application developers should >> always use the MPI-IO VFD. >> >> - Parallel HDF5 now supports collective I/O on point selections. >> >> o A few changes were added to the tools (h5diff, h5dump, and h5repack). >> >> This release contains many other changes that are not listed here. >> Please be sure to read the Release Notes for a comprehensive list of >> new features and changes: >> >> http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-1.8.13-RELEASE.txt >> >> Changes that affect maintainers of HDF5-dependent applications are >> listed in "HDF5 Software Changes from Release to Release". See: >> >> http://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html >> >> >> >> Future Changes to Supported Platforms >> ------------------------------------- >> >> Please be aware that after this release, we will be moving to >> CMake 3.0, and will add testing for VS 2013. VS 2012 will remain >> the standard. >> >> In addition, we will only support Cygwin built with CMake, and will >> be dropping VS 2010. >> >> >> >> ------------------------------------------------------------- >> For questions regarding these or other HDF issues, contact: >> >> [email protected] >> >> >> _______________________________________________ >> Hdf-forum is for HDF software users discussion. >> [email protected] >> http://mail.lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org >> >> _______________________________________________ >> Hdf-forum is for HDF software users discussion. >> [email protected] >> http://mail.lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org > > > _______________________________________________ > Hdf-forum is for HDF software users discussion. > [email protected] > http://mail.lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org > > > _______________________________________________ > Hdf-forum is for HDF software users discussion. > [email protected] > http://mail.lists.hdfgroup.org/mailman/listinfo/hdf-forum_lists.hdfgroup.org
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