[
https://issues.apache.org/jira/browse/ARROW-12026?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17305580#comment-17305580
]
Karthikeyan Janakiraman commented on ARROW-12026:
-------------------------------------------------
On devtoolset-8, this was already installed. Hope it looks good ?
{code:java}
[root@3800c0c7ea36 tmp]# rpm -qa | grep devtoolset-8
devtoolset-8-systemtap-devel-3.3-2.el7.x86_64
devtoolset-8-strace-4.24-4.el7.x86_64
devtoolset-8-dwz-0.12-1.1.el7.x86_64
devtoolset-8-8.1-1.el7.x86_64
devtoolset-8-systemtap-3.3-2.el7.x86_64
devtoolset-8-perftools-8.1-1.el7.x86_64
devtoolset-8-libquadmath-devel-8.3.1-3.2.el7.x86_64
devtoolset-8-runtime-8.1-1.el7.x86_64
devtoolset-8-dyninst-9.3.2-6.el7.x86_64
devtoolset-8-elfutils-libs-0.176-1.el7.x86_64
devtoolset-8-gdb-8.2-3.el7.x86_64
devtoolset-8-memstomp-0.1.5-5.el7.x86_64
devtoolset-8-gcc-gfortran-8.3.1-3.2.el7.x86_64
devtoolset-8-elfutils-libelf-0.176-1.el7.x86_64
devtoolset-8-systemtap-runtime-3.3-2.el7.x86_64
devtoolset-8-elfutils-0.176-1.el7.x86_64
devtoolset-8-valgrind-3.14.0-16.el7.x86_64
devtoolset-8-ltrace-0.7.91-1.el7.x86_64
devtoolset-8-gcc-8.3.1-3.2.el7.x86_64
devtoolset-8-toolchain-8.1-1.el7.x86_64
devtoolset-8-systemtap-client-3.3-2.el7.x86_64
devtoolset-8-oprofile-1.3.0-2.el7.x86_64
devtoolset-8-gcc-c++-8.3.1-3.2.el7.x86_64
devtoolset-8-binutils-2.30-55.el7.2.x86_64
devtoolset-8-libstdc++-devel-8.3.1-3.2.el7.x86_64
devtoolset-8-make-4.2.1-4.el7.x86_64
[root@3800c0c7ea36 tmp]#
{code}
I could see some progress this time cmake seems to have worked however I still
see s3 option is not being enabled and the installation tries to download from
github to which I dont seem to have access to. Is there alternative for these
github downloads ?
{code:java}
[root@3800c0c7ea36 tmp]# R CMD INSTALL arrow_3.0.0.tar.gz
* installing to library ‘/usr/lib64/R/library’
* installing *source* package ‘arrow’ ...
** package ‘arrow’ successfully unpacked and MD5 sums checked
** using staged installation
trying URL
'https://dl.bintray.com/ursalabs/arrow-r/libarrow/src/arrow-3.0.0.zip'
Error in download.file(from_url, to_file, quiet = quietly) :
cannot open URL
'https://dl.bintray.com/ursalabs/arrow-r/libarrow/src/arrow-3.0.0.zip'
trying URL
'https://www.apache.org/dyn/closer.lua?action=download&filename=arrow/arrow-3.0.0/apache-arrow-3.0.0.tar.gz'
Error in download.file(from_url, to_file, quiet = quietly) :
cannot open URL
'https://www.apache.org/dyn/closer.lua?action=download&filename=arrow/arrow-3.0.0/apache-arrow-3.0.0.tar.gz'
trying URL
'https://www.apache.org/dyn/closer.lua?action=download&filename=arrow/arrow-3.0.0/apache-arrow-3.0.0.tar.gz'
Content type 'application/x-gzip' length 8200790 bytes (7.8 MB)
==================================================
downloaded 7.8 MB*** Successfully retrieved C++ source
*** Building C++ libraries
*** Building with MAKEFLAGS= -j2
**** S3 support not available for gcc < 4.9; building with ARROW_S3=OFF
**** mimalloc support not available for gcc < 4.9; building with
ARROW_MIMALLOC=OFF
**** arrow with
SOURCE_DIR="/tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp"
BUILD_DIR="/tmp/RtmpqK4yeM/file44b5965220a" DEST_DIR="libarrow/arrow-3.0.0"
CMAKE="/usr/bin/cmake3" CC="gcc -m64 -std=gnu99" CXX="g++ -m64 -std=gnu++11"
LDFLAGS="-Wl,-z,relro" ARROW_S3=OFF ARROW_MIMALLOC=OFF
++ pwd
+ : /tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow
+ : /tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp
+ : /tmp/RtmpqK4yeM/file44b5965220a
+ : libarrow/arrow-3.0.0
+ : /usr/bin/cmake3
++ cd /tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp
++ pwd
+ SOURCE_DIR=/tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp
++ mkdir -p libarrow/arrow-3.0.0
++ cd libarrow/arrow-3.0.0
++ pwd
+ DEST_DIR=/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0
+ '[' '' = '' ']'
+ which ninja
+ '[' FALSE = false ']'
+ ARROW_DEFAULT_PARAM=OFF
+ mkdir -p /tmp/RtmpqK4yeM/file44b5965220a
+ pushd /tmp/RtmpqK4yeM/file44b5965220a
/tmp/RtmpqK4yeM/file44b5965220a /tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow
+ /usr/bin/cmake3 -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF
-DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_COMPUTE=ON
-DARROW_CSV=ON -DARROW_DATASET=ON -DARROW_DEPENDENCY_SOURCE=BUNDLED
-DARROW_FILESYSTEM=ON -DARROW_JEMALLOC=ON -DARROW_MIMALLOC=OFF -DARROW_JSON=ON
-DARROW_PARQUET=ON -DARROW_S3=OFF -DARROW_WITH_BROTLI=OFF -DARROW_WITH_BZ2=OFF
-DARROW_WITH_LZ4=OFF -DARROW_WITH_SNAPPY=OFF -DARROW_WITH_UTF8PROC=OFF
-DARROW_WITH_ZLIB=OFF -DARROW_WITH_ZSTD=OFF -DCMAKE_BUILD_TYPE=Release
-DCMAKE_INSTALL_LIBDIR=lib
-DCMAKE_INSTALL_PREFIX=/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0
-DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON
-DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=ON -G 'Unix
Makefiles' /tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp
-- Building using CMake version: 3.17.5
-- The C compiler identification is GNU 4.8.5
-- The CXX compiler identification is GNU 4.8.5
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc - works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/g++
-- Check for working CXX compiler: /usr/bin/g++ - works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Arrow version: 3.0.0 (full: '3.0.0')
-- Arrow SO version: 300 (full: 300.0.0)
-- clang-tidy not found
-- clang-format not found
-- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN)
-- infer not found
fatal: Not a git repository (or any of the parent directories): .git
-- Found Python3: /opt/anaconda3-4.4.0/bin/python3.6 (found version "3.6.1")
found components: Interpreter
-- Found cpplint executable at
/tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp/build-support/cpplint.py
-- System processor: x86_64
-- Performing Test CXX_SUPPORTS_SSE4_2
-- Performing Test CXX_SUPPORTS_SSE4_2 - Success
-- Performing Test CXX_SUPPORTS_AVX2
-- Performing Test CXX_SUPPORTS_AVX2 - Failed
-- Performing Test CXX_SUPPORTS_AVX512
-- Performing Test CXX_SUPPORTS_AVX512 - Failed
-- Arrow build warning level: PRODUCTION
Using ld linker
Configured for RELEASE build (set with cmake
-DCMAKE_BUILD_TYPE={release,debug,...})
-- Build Type: RELEASE
-- Using BUNDLED approach to find dependencies
-- ARROW_ABSL_BUILD_VERSION: 0f3bb466b868b523cf1dc9b2aaaed65c77b28862
-- ARROW_AWSSDK_BUILD_VERSION: 1.8.90
-- ARROW_AWS_CHECKSUMS_BUILD_VERSION: v0.1.5
-- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.4.59
-- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.1.5
-- ARROW_BOOST_BUILD_VERSION: 1.71.0
-- ARROW_BROTLI_BUILD_VERSION: v1.0.7
-- ARROW_BZIP2_BUILD_VERSION: 1.0.8
-- ARROW_CARES_BUILD_VERSION: 1.16.1
-- ARROW_GBENCHMARK_BUILD_VERSION: v1.5.2
-- ARROW_GFLAGS_BUILD_VERSION: v2.2.2
-- ARROW_GLOG_BUILD_VERSION: v0.4.0
-- ARROW_GRPC_BUILD_VERSION: v1.33.2
-- ARROW_GTEST_BUILD_VERSION: 1.10.0
-- ARROW_JEMALLOC_BUILD_VERSION: 5.2.1
-- ARROW_LZ4_BUILD_VERSION: v1.9.2
-- ARROW_MIMALLOC_BUILD_VERSION: v1.6.4
-- ARROW_ORC_BUILD_VERSION: 1.6.2
-- ARROW_PROTOBUF_BUILD_VERSION: v3.13.0
-- ARROW_RAPIDJSON_BUILD_VERSION: 1a803826f1197b5e30703afe4b9c0e7dd48074f5
-- ARROW_RE2_BUILD_VERSION: 2019-08-01
-- ARROW_SNAPPY_BUILD_VERSION: 1.1.8
-- ARROW_THRIFT_BUILD_VERSION: 0.12.0
-- ARROW_THRIFT_BUILD_MD5_CHECKSUM: 3deebbb4d1ca77dd9c9e009a1ea02183
-- ARROW_UTF8PROC_BUILD_VERSION: v2.5.0
-- ARROW_ZLIB_BUILD_VERSION: 1.2.11
-- ARROW_ZSTD_BUILD_VERSION: v1.4.5
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Check if compiler accepts -pthread
-- Check if compiler accepts -pthread - yes
-- Found Threads: TRUE
-- Looking for __SIZEOF_INT128__
-- Looking for __SIZEOF_INT128__ - found
-- Added static library dependency boost_system_static:
/tmp/RtmpqK4yeM/file44b5965220a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_system.a
-- Added static library dependency boost_filesystem_static:
/tmp/RtmpqK4yeM/file44b5965220a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_filesystem.a
-- Added static library dependency boost_regex_static:
/tmp/RtmpqK4yeM/file44b5965220a/boost_ep-prefix/src/boost_ep/stage/lib/libboost_regex.a
-- Boost include dir:
/tmp/RtmpqK4yeM/file44b5965220a/boost_ep-prefix/src/boost_ep
-- Boost libraries: boost_system_static;boost_filesystem_static
-- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required.
Building Apache Thrift from source
-- Building (vendored) jemalloc from source
-- Building RapidJSON from source
-- Building RE2 from source
-- Found hdfs.h at:
/tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp/thirdparty/hadoop/include/hdfs.h
-- All bundled static libraries:
boost_system_static;boost_filesystem_static;boost_regex_static;thrift::thrift;jemalloc::jemalloc;re2::re2
-- CMAKE_C_FLAGS: -O3 -DNDEBUG -Wall -Wno-attributes -msse4.2
-- CMAKE_CXX_FLAGS: -Wno-subobject-linkage -O3 -DNDEBUG -Wall
-Wno-attributes -msse4.2
-- Looking for backtrace
-- Looking for backtrace - found
-- backtrace facility detected in default set of libraries
-- Found Backtrace: /usr/include
-- Creating bundled static library target arrow_bundled_dependencies at
/tmp/RtmpqK4yeM/file44b5965220a/release/libarrow_bundled_dependencies.a
-- ---------------------------------------------------------------------
-- Arrow version: 3.0.0
--
-- Build configuration summary:
-- Generator: Unix Makefiles
-- Build type: RELEASE
-- Source directory: /tmp/RtmpqK4yeM/file44b45405feb/apache-arrow-3.0.0/cpp
-- Install prefix:
/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0
--
-- Compile and link options:
--
-- ARROW_CXXFLAGS="" [default=""]
-- Compiler flags to append when compiling Arrow
-- ARROW_BUILD_STATIC=ON [default=ON]
-- Build static libraries
-- ARROW_BUILD_SHARED=OFF [default=ON]
-- Build shared libraries
-- ARROW_PACKAGE_KIND="" [default=""]
-- Arbitrary string that identifies the kind of package
-- (for informational purposes)
-- ARROW_GIT_ID="" [default=""]
-- The Arrow git commit id (if any)
-- ARROW_GIT_DESCRIPTION="" [default=""]
-- The Arrow git commit description (if any)
-- ARROW_NO_DEPRECATED_API=OFF [default=OFF]
-- Exclude deprecated APIs from build
-- ARROW_USE_CCACHE=ON [default=ON]
-- Use ccache when compiling (if available)
-- ARROW_USE_LD_GOLD=OFF [default=OFF]
-- Use ld.gold for linking on Linux (if available)
-- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF]
-- Use precompiled headers when compiling
-- ARROW_SIMD_LEVEL=SSE4_2 [default=NONE|SSE4_2|AVX2|AVX512]
-- Compile-time SIMD optimization level
-- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=NONE|SSE4_2|AVX2|AVX512|MAX]
-- Max runtime SIMD optimization level
-- ARROW_ARMV8_ARCH=armv8-a [default=armv8-a|armv8-a+crc+crypto]
-- Arm64 arch and extensions
-- ARROW_ALTIVEC=ON [default=ON]
-- Build with Altivec if compiler has support
-- ARROW_RPATH_ORIGIN=OFF [default=OFF]
-- Build Arrow libraries with RATH set to $ORIGIN
-- ARROW_INSTALL_NAME_RPATH=ON [default=ON]
-- Build Arrow libraries with install_name set to @rpath
-- ARROW_GGDB_DEBUG=ON [default=ON]
-- Pass -ggdb flag to debug builds
--
-- Test and benchmark options:
--
-- ARROW_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Arrow examples
-- ARROW_BUILD_TESTS=OFF [default=OFF]
-- Build the Arrow googletest unit tests
-- ARROW_ENABLE_TIMING_TESTS=ON [default=ON]
-- Enable timing-sensitive tests
-- ARROW_BUILD_INTEGRATION=OFF [default=OFF]
-- Build the Arrow integration test executables
-- ARROW_BUILD_BENCHMARKS=OFF [default=OFF]
-- Build the Arrow micro benchmarks
-- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF]
-- Build the Arrow micro reference benchmarks
-- ARROW_TEST_LINKAGE=static [default=shared|static]
-- Linkage of Arrow libraries with unit tests executables.
-- ARROW_FUZZING=OFF [default=OFF]
-- Build Arrow Fuzzing executables
-- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF]
-- Enable unit tests which use large memory
--
-- Lint options:
--
-- ARROW_ONLY_LINT=OFF [default=OFF]
-- Only define the lint and check-format targets
-- ARROW_VERBOSE_LINT=OFF [default=OFF]
-- If off, 'quiet' flags will be passed to linting tools
-- ARROW_GENERATE_COVERAGE=OFF [default=OFF]
-- Build with C++ code coverage enabled
--
-- Checks options:
--
-- ARROW_TEST_MEMCHECK=OFF [default=OFF]
-- Run the test suite using valgrind --tool=memcheck
-- ARROW_USE_ASAN=OFF [default=OFF]
-- Enable Address Sanitizer checks
-- ARROW_USE_TSAN=OFF [default=OFF]
-- Enable Thread Sanitizer checks
-- ARROW_USE_UBSAN=OFF [default=OFF]
-- Enable Undefined Behavior sanitizer checks
--
-- Project component options:
--
-- ARROW_BUILD_UTILITIES=OFF [default=OFF]
-- Build Arrow commandline utilities
-- ARROW_COMPUTE=ON [default=OFF]
-- Build the Arrow Compute Modules
-- ARROW_CSV=ON [default=OFF]
-- Build the Arrow CSV Parser Module
-- ARROW_CUDA=OFF [default=OFF]
-- Build the Arrow CUDA extensions (requires CUDA toolkit)
-- ARROW_DATASET=ON [default=OFF]
-- Build the Arrow Dataset Modules
-- ARROW_FILESYSTEM=ON [default=OFF]
-- Build the Arrow Filesystem Layer
-- ARROW_FLIGHT=OFF [default=OFF]
-- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers)
-- ARROW_GANDIVA=OFF [default=OFF]
-- Build the Gandiva libraries
-- ARROW_HDFS=OFF [default=OFF]
-- Build the Arrow HDFS bridge
-- ARROW_HIVESERVER2=OFF [default=OFF]
-- Build the HiveServer2 client and Arrow adapter
-- ARROW_IPC=ON [default=ON]
-- Build the Arrow IPC extensions
-- ARROW_JEMALLOC=ON [default=ON]
-- Build the Arrow jemalloc-based allocator
-- ARROW_JNI=OFF [default=OFF]
-- Build the Arrow JNI lib
-- ARROW_JSON=ON [default=OFF]
-- Build Arrow with JSON support (requires RapidJSON)
-- ARROW_MIMALLOC=OFF [default=OFF]
-- Build the Arrow mimalloc-based allocator
-- ARROW_PARQUET=ON [default=OFF]
-- Build the Parquet libraries
-- ARROW_ORC=OFF [default=OFF]
-- Build the Arrow ORC adapter
-- ARROW_PLASMA=OFF [default=OFF]
-- Build the plasma object store along with Arrow
-- ARROW_PLASMA_JAVA_CLIENT=OFF [default=OFF]
-- Build the plasma object store java client
-- ARROW_PYTHON=OFF [default=OFF]
-- Build the Arrow CPython extensions
-- ARROW_S3=OFF [default=OFF]
-- Build Arrow with S3 support (requires the AWS SDK for C++)
-- ARROW_TENSORFLOW=OFF [default=OFF]
-- Build Arrow with TensorFlow support enabled
-- ARROW_TESTING=OFF [default=OFF]
-- Build the Arrow testing libraries
--
-- Thirdparty toolchain options:
--
-- ARROW_DEPENDENCY_SOURCE=BUNDLED [default=AUTO|BUNDLED|SYSTEM|CONDA|BREW]
-- Method to use for acquiring arrow's build dependencies
-- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF]
-- Show output from ExternalProjects rather than just logging to files
-- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON]
-- Link to shared libraries
-- ARROW_BOOST_USE_SHARED=OFF [default=ON]
-- Rely on boost shared libraries where relevant
-- ARROW_BROTLI_USE_SHARED=ON [default=ON]
-- Rely on Brotli shared libraries where relevant
-- ARROW_BZ2_USE_SHARED=ON [default=ON]
-- Rely on Bz2 shared libraries where relevant
-- ARROW_GFLAGS_USE_SHARED=ON [default=ON]
-- Rely on GFlags shared libraries where relevant
-- ARROW_GRPC_USE_SHARED=ON [default=ON]
-- Rely on gRPC shared libraries where relevant
-- ARROW_LZ4_USE_SHARED=ON [default=ON]
-- Rely on lz4 shared libraries where relevant
-- ARROW_OPENSSL_USE_SHARED=ON [default=ON]
-- Rely on OpenSSL shared libraries where relevant
-- ARROW_PROTOBUF_USE_SHARED=ON [default=ON]
-- Rely on Protocol Buffers shared libraries where relevant
-- ARROW_THRIFT_USE_SHARED=ON [default=ON]
-- Rely on thrift shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_SNAPPY_USE_SHARED=ON [default=ON]
-- Rely on snappy shared libraries where relevant
-- ARROW_UTF8PROC_USE_SHARED=ON [default=ON]
-- Rely on utf8proc shared libraries where relevant
-- ARROW_ZSTD_USE_SHARED=ON [default=ON]
-- Rely on zstd shared libraries where relevant
-- ARROW_USE_GLOG=OFF [default=OFF]
-- Build libraries with glog support for pluggable logging
-- ARROW_WITH_BACKTRACE=ON [default=ON]
-- Build with backtrace support
-- ARROW_WITH_BROTLI=OFF [default=OFF]
-- Build with Brotli compression
-- ARROW_WITH_BZ2=OFF [default=OFF]
-- Build with BZ2 compression
-- ARROW_WITH_LZ4=OFF [default=OFF]
-- Build with lz4 compression
-- ARROW_WITH_SNAPPY=OFF [default=OFF]
-- Build with Snappy compression
-- ARROW_WITH_ZLIB=OFF [default=OFF]
-- Build with zlib compression
-- ARROW_WITH_ZSTD=OFF [default=OFF]
-- Build with zstd compression
-- ARROW_WITH_UTF8PROC=OFF [default=ON]
-- Build with support for Unicode properties using the utf8proc library
-- (only used if ARROW_COMPUTE is ON)
-- ARROW_WITH_RE2=ON [default=ON]
-- Build with support for regular expressions using the re2 library
-- (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON)
--
-- Parquet options:
--
-- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF]
-- Depend only on Thirdparty headers to build libparquet.
-- Always OFF if building binaries
-- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF]
-- Build the Parquet executable CLI tools. Requires static libraries to
be built.
-- PARQUET_BUILD_EXAMPLES=OFF [default=OFF]
-- Build the Parquet examples. Requires static libraries to be built.
-- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF]
-- Build support for encryption. Fail if OpenSSL is not found
--
-- Gandiva options:
--
-- ARROW_GANDIVA_JAVA=OFF [default=OFF]
-- Build the Gandiva JNI wrappers
-- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF]
-- Include -static-libstdc++ -static-libgcc when linking with
-- Gandiva static libraries
-- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""]
-- Compiler flags to append when pre-compiling Gandiva operations
--
-- Advanced developer options:
--
-- ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF]
-- Compile with extra error context (line numbers, code)
-- ARROW_OPTIONAL_INSTALL=OFF [default=OFF]
-- If enabled install ONLY targets that have already been built. Please be
-- advised that if this is enabled 'install' will fail silently on
components
-- that have not been built
-- Outputting build configuration summary to
/tmp/RtmpqK4yeM/file44b5965220a/cmake_summary.json
-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/RtmpqK4yeM/file44b5965220a
+ /usr/bin/cmake3 --build . --target install
Scanning dependencies of target jemalloc_ep
Scanning dependencies of target boost_ep
[ 1%] Creating directories for 'jemalloc_ep'
[ 2%] Creating directories for 'boost_ep'
[ 4%] Performing download step (download, verify and extract) for 'jemalloc_ep'
[ 5%] Performing download step (download, verify and extract) for 'boost_ep'
-- boost_ep download command succeeded. See also
/tmp/RtmpqK4yeM/file44b5965220a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-download-*.log
[ 6%] No patch step for 'boost_ep'
[ 8%] No update step for 'boost_ep'
[ 9%] Performing configure step for 'boost_ep'
-- boost_ep configure command succeeded. See also
/tmp/RtmpqK4yeM/file44b5965220a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-configure-*.log
[ 10%] Performing build step for 'boost_ep'
-- boost_ep build command succeeded. See also
/tmp/RtmpqK4yeM/file44b5965220a/boost_ep-prefix/src/boost_ep-stamp/boost_ep-build-*.log
[ 12%] No install step for 'boost_ep'
[ 13%] Completed 'boost_ep'
[ 13%] Built target boost_ep
Scanning dependencies of target rapidjson_ep
[ 14%] Creating directories for 'rapidjson_ep'
[ 16%] Performing download step (download, verify and extract) for
'rapidjson_ep'
CMake Error at jemalloc_ep-stamp/jemalloc_ep-download-RELEASE.cmake:37
(message):
Command failed: 1 '/usr/bin/cmake3' '-Dmake=' '-Dconfig=' '-P'
'/tmp/RtmpqK4yeM/file44b5965220a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-download-RELEASE-impl.cmake'
See also
/tmp/RtmpqK4yeM/file44b5965220a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-download-*.log
-- stdout output is:
-- Downloading...
dst='/tmp/RtmpqK4yeM/file44b5965220a/jemalloc_ep-prefix/src/jemalloc-5.2.1.tar.bz2'
timeout='none'
-- Using
src='https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
-- Retrying...
-- Using
src='https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
-- Retry after 5 seconds (attempt #2) ...
-- Using
src='https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
-- Retry after 5 seconds (attempt #3) ...
-- Using
src='https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
-- Retry after 15 seconds (attempt #4) ...
-- Using
src='https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
-- Retry after 60 seconds (attempt #5) ...
-- Using
src='https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'--
stderr output is:
...skipping to end...
certificate: subject: CN=github.com,O="GitHub, Inc.",L=San
Francisco,ST=California,C=US start date: Mar 12 00:00:00 2021 GMT
expire date: Mar 23 23:59:59 2022 GMT common name: github.com
issuer: CN=COF-proxy-intermediate-CA-v2,OU=chiproxy06p,O=
One,L=Chicago,ST=IL,C=US GET
/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 5 ---
LOG END ---
error: downloading
'https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET /jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 6 ---
LOG END ---
error: downloading
'https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET
/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 7 ---
LOG END ---
error: downloading
'https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET /jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 8 ---
LOG END ---
error: downloading
'https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET
/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 9 ---
LOG END ---
error: downloading
'https://github.com/jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET /jemalloc/jemalloc/releases/download/5.2.1/jemalloc-5.2.1.tar.bz2
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 10
--- LOG END ---
error: downloading
'https://github.com/ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET /ursa-labs/thirdparty/releases/download/latest/jemalloc-5.2.1.tar.bz2
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 11
--- LOG END ---
CMake Error at jemalloc_ep-stamp/jemalloc_ep-download-RELEASE-impl.cmake:9
(message):
Command failed (1): '/usr/bin/cmake3' '-P'
'/tmp/RtmpqK4yeM/file44b5965220a/jemalloc_ep-prefix/src/jemalloc_ep-stamp/download-jemalloc_ep.cmake'CMake
Error at jemalloc_ep-stamp/jemalloc_ep-download-RELEASE.cmake:47 (message):
Stopping after outputting logs.
make[2]: *** [jemalloc_ep-prefix/src/jemalloc_ep-stamp/jemalloc_ep-download]
Error 1
make[1]: *** [CMakeFiles/jemalloc_ep.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
CMake Error at rapidjson_ep-stamp/rapidjson_ep-download-RELEASE.cmake:37
(message):
Command failed: 1 '/usr/bin/cmake3' '-Dmake=' '-Dconfig=' '-P'
'/tmp/RtmpqK4yeM/file44b5965220a/src/rapidjson_ep-stamp/rapidjson_ep-download-RELEASE-impl.cmake'
See also
/tmp/RtmpqK4yeM/file44b5965220a/src/rapidjson_ep-stamp/rapidjson_ep-download-*.log
-- stdout output is:
-- Downloading...
dst='/tmp/RtmpqK4yeM/file44b5965220a/src/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
timeout='none'
-- Using
src='https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Retrying...
-- Using
src='https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Retry after 5 seconds (attempt #2) ...
-- Using
src='https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Retry after 5 seconds (attempt #3) ...
-- Using
src='https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Retry after 15 seconds (attempt #4) ...
-- Using
src='https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Retry after 60 seconds (attempt #5) ...
-- Using
src='https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
-- Using
src='https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'--
stderr output is:
...skipping to end...
ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */*
The requested URL returned error: 403 Forbidden Closing connection 5
--- LOG END ---
error: downloading
'https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET
/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 6 ---
LOG END ---
error: downloading
'https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
GET
/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 7 ---
LOG END ---
error: downloading
'https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 8 ---
LOG END ---
error: downloading
'https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 9 ---
LOG END ---
error: downloading
'https://github.com/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
/miloyip/rapidjson/archive/1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 10
--- LOG END ---
error: downloading
'https://github.com/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz'
failed
status_code: 22
status_string: "HTTP response code said error"
log:
--- LOG BEGIN ---
/ursa-labs/thirdparty/releases/download/latest/rapidjson-1a803826f1197b5e30703afe4b9c0e7dd48074f5.tar.gz
HTTP/1.1 User-Agent: curl/7.29.0 Host: github.com Accept: */* The
requested URL returned error: 403 Forbidden Closing connection 11
--- LOG END ---
CMake Error at rapidjson_ep-stamp/rapidjson_ep-download-RELEASE-impl.cmake:9
(message):
Command failed (1): '/usr/bin/cmake3' '-P'
'/tmp/RtmpqK4yeM/file44b5965220a/src/rapidjson_ep-stamp/download-rapidjson_ep.cmake'CMake
Error at rapidjson_ep-stamp/rapidjson_ep-download-RELEASE.cmake:47 (message):
Stopping after outputting logs.
make[2]: *** [src/rapidjson_ep-stamp/rapidjson_ep-download] Error 1
make[1]: *** [CMakeFiles/rapidjson_ep.dir/all] Error 2
gmake: *** [all] Error 2
+ popd
/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow
PKG_CFLAGS=-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW
PKG_LIBS=-larrow_dataset -lparquet -larrow
** libs
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c array.cpp -o array.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c array_from_vector.cpp -o
array_from_vector.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c array_to_vector.cpp -o
array_to_vector.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c arraydata.cpp -o arraydata.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c arrowExports.cpp -o
arrowExports.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c buffer.cpp -o buffer.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c chunkedarray.cpp -o
chunkedarray.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c compression.cpp -o compression.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c compute.cpp -o compute.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c csv.cpp -o csv.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c dataset.cpp -o dataset.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c datatype.cpp -o datatype.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c expression.cpp -o expression.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c feather.cpp -o feather.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c field.cpp -o field.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c filesystem.cpp -o filesystem.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c imports.cpp -o imports.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c io.cpp -o io.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c json.cpp -o json.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c memorypool.cpp -o memorypool.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c message.cpp -o message.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c parquet.cpp -o parquet.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c py-to-r.cpp -o py-to-r.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c recordbatch.cpp -o recordbatch.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c recordbatchreader.cpp -o
recordbatchreader.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c recordbatchwriter.cpp -o
recordbatchwriter.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c scalar.cpp -o scalar.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c schema.cpp -o schema.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c symbols.cpp -o symbols.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c table.cpp -o table.o
g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG
-I/tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/libarrow/arrow-3.0.0/include
-DARROW_R_WITH_ARROW -I"/usr/lib64/R/library/cpp11/include"
-I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
-fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
-grecord-gcc-switches -m64 -mtune=generic -c threadpool.cpp -o threadpool.o
g++ -m64 -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -o arrow.so
array.o array_from_vector.o array_to_vector.o arraydata.o arrowExports.o
buffer.o chunkedarray.o compression.o compute.o csv.o dataset.o datatype.o
expression.o feather.o field.o filesystem.o imports.o io.o json.o memorypool.o
message.o parquet.o py-to-r.o recordbatch.o recordbatchreader.o
recordbatchwriter.o scalar.o schema.o symbols.o table.o threadpool.o
-larrow_dataset -lparquet -larrow -L/usr/lib64/R/lib -lR
installing to /usr/lib64/R/library/00LOCK-arrow/00new/arrow/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
Warning in file.copy(file.path(R.home("doc"), "html", "R.css"), outman) :
problem copying /usr/share/doc/R-3.6.0/html/R.css to
/usr/lib64/R/library/00LOCK-arrow/00new/arrow/html/R.css: No such file or
directory
converting help for package ‘arrow’
finding HTML links ... done
ArrayData html
ChunkedArray html
Codec html
CsvReadOptions html
CsvTableReader html
DataType html
Dataset html
DictionaryType html
Expression html
FeatherReader html
Field html
FileFormat html
FileInfo html
FileSelector html
FileSystem html
FileWriteOptions html
FixedWidthType html
InputStream html
MemoryPool html
Message html
MessageReader html
OutputStream html
ParquetArrowReaderProperties html
ParquetFileReader html
ParquetFileWriter html
ParquetWriterProperties html
Partitioning html
RecordBatch html
RecordBatchReader html
RecordBatchWriter html
Scalar html
Scanner html
Schema html
Table html
array html
arrow-package html
arrow_available html
arrow_info html
buffer html
cast_options html
codec_is_available html
compression html
copy_files html
cpu_count html
data-type html
dataset_factory html
default_memory_pool html
dictionary html
enums html
flight_connect html
flight_get html
flight_put html
hive_partition html
install_arrow html
install_pyarrow html
list_flights html
load_flight_server html
make_readable_file html
map_batches html
match_arrow html
mmap_create html
mmap_open html
open_dataset html
read_delim_arrow html
read_feather html
read_ipc_stream html
read_json_arrow html
read_message html
read_parquet html
read_schema html
reexports html
Rd warning: /tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/man/reexports.Rd:26:
file link ‘starts_with’ in package ‘tidyselect’ does not exist and so has been
treated as a topic
Rd warning: /tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/man/reexports.Rd:26:
file link ‘everything’ in package ‘tidyselect’ does not exist and so has been
treated as a topic
Rd warning: /tmp/RtmpnECges/R.INSTALL437112f5bd0/arrow/man/reexports.Rd:26:
file link ‘one_of’ in package ‘tidyselect’ does not exist and so has been
treated as a topic
s3_bucket html
type html
unify_schemas html
write_dataset html
write_feather html
write_ipc_stream html
write_parquet html
write_to_raw html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (arrow)
Warning in file.create(f.tg) :
cannot create file '/usr/share/doc/R-3.6.0/html/packages.html', reason 'No
such file or directory'
Warning in utils::make.packages.html(.Library, docdir = R.home("doc")) :
cannot update HTML package index
[root@3800c0c7ea36 tmp]#
{code}
> [R] NotImplemented: Got S3 URI but Arrow compiled without S3 support
> --------------------------------------------------------------------
>
> Key: ARROW-12026
> URL: https://issues.apache.org/jira/browse/ARROW-12026
> Project: Apache Arrow
> Issue Type: Bug
> Components: R
> Affects Versions: 3.0.0
> Environment: QA
> Reporter: Karthikeyan Janakiraman
> Priority: Trivial
>
> I have followed below steps however seeing the error on summary when I try to
> read parquet from S3.
>
> 1. export LIBARROW_MINIMAL=false
> {code:java}
> [root@c1cce557dba3 tmp]# printenv | grep LIBARROW_MINIMAL
> LIBARROW_MINIMAL=false{code}
>
> 2. Install arrow
> {code:java}
> R CMD INSTALL arrow_3.0.0.tar.gz
> {code}
>
> 3. Get into R prompt and load arrow
> {code:java}
> > library('arrow')
> Attaching package: ‘arrow’The following object is masked from
> ‘package:utils’: timestamp
> >
> {code}
> 4. When I try to read a parquet from S3 bucket seeing below error,
>
> {code:java}
> > df <- read_parquet("s3://my_bucket/test-parquet/refinement.parquet")
> Error: NotImplemented: Got S3 URI but Arrow compiled without S3 support
> {code}
>
--
This message was sent by Atlassian Jira
(v8.3.4#803005)
