Hello Sam
All can be done:
> Is there any possibility of viewing both the protein and the ligand in the
> same frame,
> which will enable me to view the ligand's docking with the protein?
either of these:
frame all;
frame *;
will do that. They are not in the same frame, but you see both. If you really
need a single
frame, you should use
load "ligand.mol2";
set appendNew false;
load "protein.mol2";
(but then selection as explained below will be more difficult)
> 1. Is there any possibility of viewing one frame as 'sticks and balls' and
> the other frame as
> 'wireframe'?
select file=1; wireframe 0.15; spacefill 23%;
select file=2; wireframe on; spacefill off;
> 2. Can change is colours be made for the ligand alone?
followe the same selection method
Alternatively to "select file" you can also use
select 2.1;
select 1.1;
(Both will only work if you have NOT loaded them both into a single frame)
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