Petr wrote:
> I found not much info about toolbar buttons, so experimenting with the > toolbar button [arrow] with pop-up [Select atom or region] I assumed that > I will be able to select atoms or sequences of atoms "on screen" with > result similar to issuing <select a> or <select a-b> on the console. > Instead, the function is "only" [Highlights those already selected atoms > or regions]. Perhaps modification of the pop-up text might be appropriate, > believe or not, I spent some time clicking and hitting ctrl, alt etc.and > browsing through doc's to make sure that the "advertised" function is not > there (Or is it?) > I would vote for something like that to be implemented eventually (i.e. > with that button pressed, whatever is clicked, or - for more > atoms-residues > - shift-clicked or "lassoed" by mouse become selected, highlighted by > yellow "halloo" and subsequent commands act on that selection) > > In atom expressions, Rasmol had <within( distance, mol_selection)> command > - allowing to select say active site or drug binding region. Is this > available? > On similar theme, is there any way to select bonds longer then > user-defined > threshold? Might be useful for getting rid of non-real bonds calculated > automatically in cases the coordinates allow that. > > Re linking "correlation" matrix to protein structure rendering - I have > program that converts my matrices to xyz file and the Jmol rendering is > just fine (I am finalizing the color scheme). > You hinted, that there might be a solution how to transfer the picked > "atoms" in the "correlation matrix rendering" to the protein picture? > > Thanks Petr > > > > Dr. Petr Pancoska > Department of Pathology > SUNY Stony Brook, NY 11794 > phone: (631)-444-3030 > > ****************************************************************************** > > This e- mail message, including any attachments, > is for the sole use of the intended recipient(s) and may > contain confidential and privileged information. > Any unauthorized review, use, disclosure or distribution is prohibited. > If you are not the intended recipient, please contact the sender > by e-mail and destroy all copies of the original. > ****************************************************************************** > > > > ------------------------------------------------------- > SF email is sponsored by - The IT Product Guide > Read honest & candid reviews on hundreds of IT Products from real users. > Discover which products truly live up to the hype. Start reading now. > http://productguide.itmanagersjournal.com/ > _______________________________________________ > Jmol-users mailing list > Jmol-users@lists.sourceforge.net > https://lists.sourceforge.net/lists/listinfo/jmol-users > -------------------------------------------------- Michael T. Howard [EMAIL PROTECTED] 23 Algonquin Avenue Andover, MA 01810-5527 tele 978-474-4559 USA cell 978-886-3697 -------------------------------------------------- ------------------------------------------------------- The SF.Net email is sponsored by: Beat the post-holiday blues Get a FREE limited edition SourceForge.net t-shirt from ThinkGeek. It's fun and FREE -- well, almost....http://www.thinkgeek.com/sfshirt _______________________________________________ Jmol-users mailing list Jmol-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/jmol-users
