I will check this out. On 3/21/07, Volker Blum <[EMAIL PROTECTED]> wrote: > On write state in jmol 11.1.25: > > using > > write state "file.spt" > > the quit application, reload structure, and > > script "file.spt" > > restored everything (including background color) > > but did not reproduce H bonds as H bonds, replacing them with regular bonds > instead (see below). > > thanks! > > VB > > On Wednesday 21 March 2007 19:47, Frieda Reichsman wrote: > > On Mar 21, 2007, at 2:21 PM, [EMAIL PROTECTED] wrote: > > > from the Jmol application (not applet): > > > > > > write state "somefile.spt" > > > > > > > > > then, at your leisure: > > > > > > script "somefile.spt" > > > > > > should get you back EXACTLY where you left off. If it doesn't I > > > want to know! > > > > A couple of things that were not reproduced exactly with write state > > in Jmol 11.1.18: > > > > - background applet color was black instead of white. > > - incomplete rendering of hydrogen bonds created/modified with the > > connect command > > - backbone trace applied through most of the model was extended into > > an area where it had not been present, when the state script was > > called after a script that had the entire backbone in trace (i.e., it > > did not turn the trace off in that area. I don't know whether a state > > script is intended to work from a "blank slate" or whether it should > > be able to follow any other script.) > > - problem with isosurface, I think it did not appear. I know I wound > > up putting it in by hand. > > > > Frieda > > > > /////////////////////////////////////////// > > > > Frieda Reichsman, PhD > > Molecules in Motion > > Interactive Molecular Structures > > http://www.moleculesinmotion.com > > > > /////////////////////////////////////////// > > -- > Dr. Volker Blum > Theory Department > Fritz Haber Institute of the Max Planck Society > Faradayweg 4-6 > D-14195 Berlin > Germany > Phone: +49 30 8413-4846 > Fax: +49 30 8413 4700 > email [EMAIL PROTECTED] > > "A physicist is the atoms' way of thinking about atoms." > > ------------------------------------------------------------------------- > Take Surveys. Earn Cash. Influence the Future of IT > Join SourceForge.net's Techsay panel and you'll get the chance to share your > opinions on IT & business topics through brief surveys-and earn cash > http://www.techsay.com/default.php?page=join.php&p=sourceforge&CID=DEVDEV > _______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users >
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