Hi Bob,
OK, have checked this. Sorry it took a while.
Not fixed in 11.1.27:
Isosurface is created but not shown.
Hydrogen bonds created and appear, but not rendered as per additional
commands (i.e., thicker, black).
Fixed in 11.27:
Backbone does seem to get turned off appropriately now.
Background applet color is reproduced correctly.
Frieda
On Mar 24, 2007, at Mar 24, 6:03 PM, Bob Hanson wrote:
Frieda, can you verify that these are or are not fixed in 11.1.27,
please.
On 3/21/07, Frieda Reichsman <[EMAIL PROTECTED]> wrote:
On Mar 21, 2007, at 2:21 PM, [EMAIL PROTECTED] wrote:
from the Jmol application (not applet):
write state "somefile.spt"
then, at your leisure:
script "somefile.spt"
should get you back EXACTLY where you left off. If it doesn't I
want to
know!
A couple of things that were not reproduced exactly with write
state in Jmol
11.1.18:
- background applet color was black instead of white.
- incomplete rendering of hydrogen bonds created/modified with the
connect command
- backbone trace applied through most of the model was extended
into an area where it had not been present, when the state script
was called after a
script that had the entire backbone in trace (i.e., it did not
turn the
trace off in that area. I don't know whether a state script is
intended to
work from a "blank slate" or whether it should be able to follow
any other
script.)
- problem with isosurface, I think it did not appear. I know I
wound up
putting it in by hand.
Frieda
///////////////////////////////////////////
Frieda Reichsman, PhD
Molecules in Motion
Interactive Molecular Structures
http://www.moleculesinmotion.com
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Interactive Molecular Structures
http://www.moleculesinmotion.com
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