You're welcome ! I do not think it is documented. It is part of the modifications Jmol underwent when the Jmol version of protein explorer has been released. As you mention, the info from seqres and from the atom list can be different so be confident that your script has not been designed in vain ! Do you know of the "Sequence Manipulation Site" ? http:// www.bioinformatics.org/sms2/index.html It provides a lot of javascripts to deal with sequences (including pairwise alignment) Paul
Le 26 mai 09 à 10:25, Angel Herráez a écrit : > El 26 May 2009 a las 9:30, Paul Pillot escribió: > >> Angel, have you tried the "show sequence" command ? > > Hey, Paul, thanks for that! > I had never used it, so didn't remember/know that it exists. Silly > me, I've being coding manually what is already there. > > It's a good thing, although not related to my problem with security. > The info provided by "show sequence" comes from the ATOM records, not > from the SEQRES records in the header (in fact, I'm working on > comparing both). > > Thanks > > ------------------------------------------------------------------------------ Register Now for Creativity and Technology (CaT), June 3rd, NYC. CaT is a gathering of tech-side developers & brand creativity professionals. Meet the minds behind Google Creative Lab, Visual Complexity, Processing, & iPhoneDevCamp asthey present alongside digital heavyweights like Barbarian Group, R/GA, & Big Spaceship. http://www.creativitycat.com _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
