Thanks Bob and Angel for pointing me in the right direction. I had a few
oddities trying to get the html written on the PC (path problems related to
use of forward and backslash) but it works beautifully now.
I used Angel's suggestion of "load MODELS ". I checked memory usage and
cannot see a significant differences between loading one model or 14, so
great advice. And the example to sync views was perfect.
Next step is to do the data transformations and map colors to atoms for each
model . Thanks for all the help!
- Brian
From: Robert Hanson [mailto:[email protected]]
Sent: Wednesday, December 02, 2009 1:39 PM
To: [email protected]
Subject: Re: [Jmol-users] displaying multiple models
presuming here you are using the applet, you use two jmolApplet() commands,
usually in a <table> construct. See, for example,
http://chemapps.stolaf.edu/jmol/docs/examples-11/sync2.htm
On Wed, Dec 2, 2009 at 12:33 PM, Brian Moldover <[email protected]> wrote:
So do you load the pdb file multiple times? I'm reading the documentation
but obviously not clear on how to do this or I wouldn't have asked J
From: Robert Hanson [mailto:[email protected]]
Sent: Wednesday, December 02, 2009 12:13 PM
To: [email protected]
Subject: Re: [Jmol-users] displaying multiple models
You just use two applets and mouse-synchronize them
On Wed, Dec 2, 2009 at 9:44 AM, Brian Moldover <[email protected]> wrote:
Hello all,
Is there a way to display multiple models contained in a single PDB file as
a set of tiled windows, or something similar, as opposed to the overlaid
structures? I using a custom coloring for atoms which will be different for
each molecule, and would like to be able to visually compare each model
side-by-side. These are mostly NMR structures, hence the multiple models.
Brian Moldover, Ph.d.
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Robert M. Hanson
Professor of Chemistry
St. Olaf College
1520 St. Olaf Ave.
Northfield, MN 55057
http://www.stolaf.edu/people/hansonr
phone: 507-786-3107
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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Version: 8.5.238 / Virus Database: 270.14.84/2530 - Release Date: 11/27/09
07:58:00
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