Le 14 sept. 2011 à 18:53, Angel Herráez a écrit :

> That's a nice app, Paul!
Thanks, but the credit goes to Jmol and Chemdoodle developpers !

> 
> Maybe you don't have the problem because the model starts with a 
> methane, 4 H in place already. I don't know...
I used to have this very same problem when I used jmolLoadInline() instead of 
load... filter "2D"
Following Bob's advice I used filter "2D" and the problem disappeared

> 
> Are you using MOL or SMILES for the transfer between ChemDoodle and 
> Jmol?
It's only MOL files. I added an extra  editing routine to zero the third 
dimension in the ChemDoodle->Jmol and another extra routine to remove the H 
atoms from Jmol or Cactus resolver before sending MOL files to ChemDoodle
> 
> I had a look at ChemDoodle some time ago but it was still too simple. 
> Now it is better
I picked it because I am unable to delve in JAVA programming but I felt able to 
modify the javascript in order to capture modifications made to the sketcher.
Plus working for undergraduate students, I don't need complex features !

-Paul



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