I am planning on using the applet and will be attempting to generate fairly "standard" objects such as spheres, cones, parallelepipeds, etc. Mostly geometric objects. It should not be a completely irregular object.
On Wed, Sep 14, 2011 at 1:20 PM, Robert Hanson <[email protected]> wrote: > I realize there is not a lot there on that, and some of it has recently > changed. > > Q: Are you planning to use the applet or the application? > Q: Will this be fairly "standard" functions, or something you definitely > need to generate yourself? > > On Wed, Sep 14, 2011 at 12:09 PM, Nicholas Smith <[email protected]>wrote: > >> Hello, >> >> I'm fairly new to Jmol and have been tinkering with methods of inserting >> isosurfaces into protein space. I've been looking into the documentation for >> the functionXY and functionXYZ isosurface options and was wondering how to >> accomplish a couple things: >> >> functionXYZ: >> What sort of data should I fill in the returned array with? (the >> fxyz[ni][nj][nk]) >> Is it a potential map of sorts? What is it? >> >> functionXY: >> I messed around with mainly the ni, nj, and nk arguments, and the maximum >> values passed in for each argument is an 11. Is there a way to increase the >> grid space that the function is graphed over, or is this the maximum >> distance? >> >> This is the documentation I've been going off of: >> http://chemapps.stolaf.edu/jmol/docs/#isosurface >> If there's a better source let me know. >> >> I would appreciate any suggestions, >> Nick Smith >> >> ------------------------------------------------------------------------------ >> BlackBerry® DevCon Americas, Oct. 18-20, San Francisco, CA >> Learn about the latest advances in developing for the >> BlackBerry® mobile platform with sessions, labs & more. >> See new tools and technologies. Register for BlackBerry® DevCon today! >> http://p.sf.net/sfu/rim-devcon-copy1 >> _______________________________________________ >> Jmol-users mailing list >> [email protected] >> https://lists.sourceforge.net/lists/listinfo/jmol-users >> >> > > > -- > Robert M. Hanson > Professor of Chemistry > St. Olaf College > 1520 St. Olaf Ave. > Northfield, MN 55057 > http://www.stolaf.edu/people/hansonr > phone: 507-786-3107 > > > If nature does not answer first what we want, > it is better to take what answer we get. > > -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900 > > > ------------------------------------------------------------------------------ > BlackBerry® DevCon Americas, Oct. 18-20, San Francisco, CA > Learn about the latest advances in developing for the > BlackBerry® mobile platform with sessions, labs & more. > See new tools and technologies. Register for BlackBerry® DevCon today! > http://p.sf.net/sfu/rim-devcon-copy1 > _______________________________________________ > Jmol-users mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/jmol-users > >
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