Wow, Chuck! That's really JavaScript, huh? I actually had to look behind
the scenes to believe it!
We've come a long way in a year!
Surfaces can be slow to create -- if you get interested in that, let me
show you how JVXL works. Much much faster than creating the surface from
scratch every time.
Bob
On Thu, Dec 12, 2013 at 12:23 PM, Charles Gasser <[email protected]>wrote:
> >> Finally am I wrong? Can scripts be done without making use of the PHP
> >> code?
> >>
> >>
> >That php piece will be called if you request a binary format file (gz,
> zip,
> >pse, etc.) from Safari, Chrome, or MSIE. Those browsers can't transfer
> that
> >sort of file directly; they need a server-side piece. But they will have
> to
> >have that ON YOUR SERVER. In addition, that piece processes
> image-creation
> >requests and "turns around" binary data such as JPG and ZIP files created
> >by the JSmol on the page and simply returns it. That second part of the
> >service could be anywhere, including chemapps. I have every reason to
> >believe chemapps.stolaf.edu will be around for quite some time. So that
> >should not be a problem.
>
> >What is the call to that server look like? What's the URL?
>
> >Bob
>
>
> Bob,
>
> Thank you very much for the quick answer. It has completely answered my
> question.
>
>
> The scripts I am referring to are simply rasmol scripts to alter the
> appearance of the structure e. g. "spin on;". I had constructed my pages
> starting from your "supersimple.htm" example which included in the initial
> function the line:
>
>
> serverURL: "http://chemapps.stolaf.edu/jmol/jsmol/jsmol.php";
>
>
> I found that when I changed the URL to my server, the page did not work.
> And so I had thought it was essential to have an active php server
> accessed. But with the information you provide, I see that I should have
> no need for this for the simple things I am doing. A simple deletion of
> that line from my pages has no effect on their function (I should have
> tried that sooner). So once I edit my pages to remove this I will no
> longer have reference to any outside server on my pages.
>
>
> Here is an example of one of my pages:
>
>
> http://www.mcb.ucdavis.edu/courses/jsmol/madjs.htm
>
>
> I only use .pdb files and so I should have no need for any of the
> functions you mention so far as I can tell.
>
>
> I will edit all of my pages to remove calls to your server.
>
>
> Thanks!
>
>
> Jaim,
>
> Thanks for bringing proteopedia to my attention. I will consider your
> offer. Right now during development it is simplest to host my pages on my
> Dept. server. I am also considering ChemWiki and BioWiki which are
> NSF-funded projects hosted at my institution.
>
>
> Best wishes and thanks again for JSmol,
>
> Chuck
>
> ==============
> Charles S. Gasser
> Professor
> Dept. of Molecular and Cellular Biology
> University of California, Davis
> 1 Shields Ave.
> Davis, CA 95616
>
> 104 Briggs Hall
> 530 752-1013
>
>
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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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