j2sPath could be anywhere, including on another server. It doesn't have to
be ./j2s, but that is the default, and that is why it doesn't "seem" to
need it.
On Wed, Jan 29, 2014 at 2:21 PM, Charles Harrison Shubert
<cshub...@mit.edu>wrote:
> Thanks, Bob! JSmol is really amazing.
>
> Info is now pretty minimalist and I am not reusing it.
>
> I was wondering why Info needs to specify j2sPath given that Jmol seems
> to locate the js path without an explicit path name in Info. I think I'm
> missing something here that may be important when I deploy my app.
>
> thanks,
>
> --Chuck
>
> On Jan 29, 2014, at 2:41 PM, Robert Hanson <hans...@stolaf.edu>
> wrote:
>
>
>
>
> On Wed, Jan 29, 2014 at 10:42 AM, Charles Harrison Shubert <
> cshub...@mit.edu> wrote:
>
>
>> Here's a follow on question: Assuming that I've created a Jmol Object
>> using an Info variable, what happens when I change (say) Info.script
>> instead of calling the script() function?
>>
>>
> The Info object is only used at applet start-up. After that all applet
> parameters are transferred (after adding default options to Info itself --
> so that you can inspect that as you have) to the variable applet.__Info,
> where applet is your applet object. These values in Info are then never
> read again and may be changed when setting up the next object.
>
> It is recommended that you use different Info variables for different
> applets, but you don't have to.
>
>
>
>> Many thanks,
>>
>> --Chuck
>>
>> On Jan 28, 2014, at 7:13 PM, Otis Rothenberger <osrot...@chemagic.com>
>> wrote:
>>
>> Chuck,
>>
>> I'm sorry. I misunderstood. I thought you were trying to write Info
>> variable data to Jmol.setInfo.
>>
>> Otis
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>>
>>
>>
>>
>> On Jan 28, 2014, at 12:54 PM, Otis Rothenberger <osrot...@chemagic.com>
>> wrote:
>>
>> Chuck and Angle,
>>
>> I think I'm in basic agreement with Angle. I look at this as a scratch
>> pad per the following JS function:
>>
>> function scratchPad(header, content) {
>> header = (!header) ? "" : header;
>> content = (!content) ? "" : content;
>> if (header == "" && content == "") { Jmol.setInfo(jmolApplet0, content,
>> false); return null; }
>> jmolApplet0._infoHeader = header;
>> Jmol.setInfo(jmolApplet0, content, true);
>> return null;
>> }
>>
>> I write to it as needed using the above - e.g. display pdb header or pdb
>> content. Storage of a given content/header pair would have to be in some
>> type of global variable. Long term storage would have to be server side,
>> although for small bits of information I've used cookies.
>>
>> Only because I found out the hard way, 10 cholesterol molfile cookies
>> will break the cookie jar. I did not realize what a pain a broken cookie
>> jar could be for the user!
>>
>> Otis
>>
>> --
>> Otis Rothenberger
>> o...@chemagic.com
>> http://chemagic.com
>>
>>
>>
>>
>> On Jan 28, 2014, at 12:16 PM, Angel Herráez <angel.herr...@uah.es> wrote:
>>
>> Hi, Chuck
>>
>> this is how I see it (but I may not be right)
>>
>> There is not "your" variable and "Jmol's" variable. The single Info
>> variable belongs to the Jmol Object once you invoke getApplet.
>>
>> What you do is initialize some values/parameters that are part of the
>> Info variable (which is more properly a Javascript object with many
>> name/value pairs). Jmol has defaults for all of them and will change
>> just the ones you state.
>> So I am not suprised at all that Jmol "writes" in the Info variable.
>>
>> In summary
>> 1. a single Info variable
>> 2. has defaults for all its properties or parts or parameters
>> 3. the defaults are overwritten by your data
>> 4. Jmol will be using all the time the single Info variable
>>
>>
>> Ah, of course if you have two Jmols they may use separate Infos,
>> that's why you need to assign Info in the Jmol.getApplet() call.
>>
>>
>>
>> ------------------------------------------------------------------------------
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>> security intelligence. It gives you real-time visual feedback on key
>> security issues and trends. Skip the complicated setup - simply import
>> a virtual appliance and go from zero to informed in seconds.
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>> security intelligence. It gives you real-time visual feedback on key
>> security issues and trends. Skip the complicated setup - simply import
>> a virtual appliance and go from zero to informed in seconds.
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>>
>
>
> --
> Robert M. Hanson
> Larson-Anderson Professor of Chemistry
> St. Olaf College
> Northfield, MN
> http://www.stolaf.edu/people/hansonr
>
>
> If nature does not answer first what we want,
> it is better to take what answer we get.
>
> -- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
>
>
> ------------------------------------------------------------------------------
> WatchGuard Dimension instantly turns raw network data into actionable
> security intelligence. It gives you real-time visual feedback on key
> security issues and trends. Skip the complicated setup - simply import
> a virtual appliance and go from zero to informed in seconds.
>
> http://pubads.g.doubleclick.net/gampad/clk?id=123612991&iu=/4140/ostg.clktrk_______________________________________________
> Jmol-users mailing list
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>
>
>
> ------------------------------------------------------------------------------
> WatchGuard Dimension instantly turns raw network data into actionable
> security intelligence. It gives you real-time visual feedback on key
> security issues and trends. Skip the complicated setup - simply import
> a virtual appliance and go from zero to informed in seconds.
>
> http://pubads.g.doubleclick.net/gampad/clk?id=123612991&iu=/4140/ostg.clktrk
> _______________________________________________
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>
--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
------------------------------------------------------------------------------
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security issues and trends. Skip the complicated setup - simply import
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