thanks Angel and Bob, Kind of sad to have invisible atoms in Jmol. In my previous attempt with "load data", I used the first 21 ATOM lines of my pdb file. Within the Jmol window, it does show the model with 21 atoms, 0 bonds. I could not seem to change their style and color them, by the menu or explicit commands. I did fumble within the Jmol menu to File / Load / Reload The molecule was then visible, as ball & stick with colors by element. It changed the name of my model to "string" (second line) and then correctly indicated 20 bonds.
How can I program the "Reload" ? guessing Refresh or Reload did not work. Michael Marden ------------------------------------------------------------------------------ Want excitement? Manually upgrade your production database. When you want reliability, choose Perforce Perforce version control. Predictably reliable. http://pubads.g.doubleclick.net/gampad/clk?id=157508191&iu=/4140/ostg.clktrk _______________________________________________ Jmol-users mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/jmol-users
