On 04/23/2015 02:20 AM, Robert Hanson wrote:
> The missing info is that you need
>
>
>
> * set picking DRAGSELECTED set allowMoveAtoms TRUE*
> in order to move subsets of atoms in a molecule
>
> along with
>
>
> * set allowRotateSelected TRUE*
>
> if you want to also rotate them with alt-left
>
> I've just spent some time looking closely at the difference between
>
>
>
> *set dragSelected*
> and
>
>
>
> *set picking dragSelected*
> This is not trivial to describe. The two definitely do different things.
> Basically, set dragSelected adds new functionality to Jmol with alt-drag
> and alt-shift drag, and set picking dragSelected replaces
> the standard mouse drag with a move action and also adds rotate and z-shift
> options
>
>
> // see footnotes below for ^, #, *, and $
> //
> // settings:^ set picking dragSelected set dragSelected
> //
> // move:# drag alt-shift-drag
> // rotate:#* alt-drag alt-drag
> // z-shift:# shift-drag (n/a)
> //
> // double-click:$ (starts measurement) (sets selected if set
> picking SELECT)
> //
> // # all actions involve whole molecules unless set allowMoveAtoms
> TRUE
> // ^ set picking dragSelected overrules set dragSelected
> // * rotate requires set allowRotateSelected TRUE
> // $ set dragSelected allows setting of a new molecule with
> double-click when set picking SELECT
> // $ set picking dragSelected allows measurements with double-click, as
> usual
>
Bob, thank you very much for the explanations. It is much clearer now.
You havn't mentioned yet 'set pickingStyle' which additionally modifies
the behaviour.
For example with 'set picking dragSelected', "z-shift" and "rotate"
don't work together with 'set pickingStyle drag select'. Instead
"shift-drag" and "alt-drag" start a selection rubberband. With 'set
pickingStyle select toggle', "z-shift" and "rotate" do work.
Considering all the information I gathered so far, the following three
option sets are more or less suitable for moving around selected atoms
independent of their connectivity in Jmol 14.3.13:
==== Option Set 1 ================
set allowMoveAtoms on;
set allowRotateSelected on;
set picking dragSelected;
set pickingStyle select toggle;
set dragSelected off;
---- Mouse Behaviour Option Set 1 ---
x/y-shift selected: drag (any atom)
z-shift selected: shift-drag (any atom)
rotate selected: alt-drag (any atom)
select single atom: [not available]
deselect single atom: [not available]
select multiple atoms: [not available]
deselect multiple atoms: [not available]
==== Option Set 2 ================
set allowMoveAtoms on;
set allowRotateSelected on;
set picking dragSelected;
set pickingStyle select drag;
set dragSelected off;
---- Mouse Behaviour Option Set 2 ---
x/y-shift selected: drag (any atom)
z-shift selected: [not available]
rotate selected: [not available]
select single atom: shift-drag (around unselected atom),
alt-drag (around atom)
deselect single atom: shift-drag (around selected atoms)
select multiple atoms: shift-drag (around unselected atoms),
alt-drag (around atoms)
deselect multiple atoms: shift-drag (around selected atoms)
==== Option Set 3 ================
set allowMoveAtoms on;
set allowRotateSelected on;
set picking atom;
set pickingStyle select toggle;
set dragSelected on;
---- Mouse Behaviour Option Set 3 ---
x/y-shift selected: shift-alt-drag (anywhere)
z-shift selected: [not available]
rotate selected: alt-drag (anywhere)
select single atom: click (unselected atom),
double-click (atom, others are deselected)
deselect single atom: click (selected atom)
select multiple atoms: [not available]
deselect multiple atoms: [not available]
==================================
Set 1 totally disables mouse-based selection changes and enables all
three movement types (x/y-shift, z-shift, rotate).
Set 2 enables mouse-based single/multiple atom selection changes and
enables only one movement type (x/y-shift).
Set 3 enables mouse-based single atom selection changes and enables two
movement types (x/y-shift, rotate).
Regards,
Rolf
--
Rolf Huehne
Postdoc
Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI)
Beutenbergstrasse 11
07745 Jena, Germany
Phone: +49 3641 65 6205
Fax: +49 3641 65 6210
E-Mail: [email protected]
Website: http://www.fli-leibniz.de
Scientific Director: Prof. Dr. K. Lenhard Rudolph
Head of Administration: Dr. Daniele Barthel
Chairman of Board of Trustees: Dennys Klein
VAT No: DE 153 925 464
Register of Associations: No. 230296, Amtsgericht Jena
Tax Number: 162/141/08228
------------------------------------------------------------------------------
BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT
Develop your own process in accordance with the BPMN 2 standard
Learn Process modeling best practices with Bonita BPM through live exercises
http://www.bonitasoft.com/be-part-of-it/events/bpm-camp-virtual- event?utm_
source=Sourceforge_BPM_Camp_5_6_15&utm_medium=email&utm_campaign=VA_SF
_______________________________________________
Jmol-users mailing list
[email protected]
https://lists.sourceforge.net/lists/listinfo/jmol-users
