It's pretty much a nightmare. Maybe you could get that on the Wiki.
On Thu, Apr 23, 2015 at 12:37 PM, Rolf Huehne <rhue...@fli-leibniz.de>
wrote:
> On 04/23/2015 02:20 AM, Robert Hanson wrote:
> > The missing info is that you need
> >
> >
> >
> > * set picking DRAGSELECTED set allowMoveAtoms TRUE*
> > in order to move subsets of atoms in a molecule
> >
> > along with
> >
> >
> > * set allowRotateSelected TRUE*
> >
> > if you want to also rotate them with alt-left
> >
> > I've just spent some time looking closely at the difference between
> >
> >
> >
> > *set dragSelected*
> > and
> >
> >
> >
> > *set picking dragSelected*
> > This is not trivial to describe. The two definitely do different things.
> > Basically, set dragSelected adds new functionality to Jmol with alt-drag
> > and alt-shift drag, and set picking dragSelected replaces
> > the standard mouse drag with a move action and also adds rotate and
> z-shift
> > options
> >
> >
> > // see footnotes below for ^, #, *, and $
> > //
> > // settings:^ set picking dragSelected set
> dragSelected
> > //
> > // move:# drag
> alt-shift-drag
> > // rotate:#* alt-drag
> alt-drag
> > // z-shift:# shift-drag
> (n/a)
> > //
> > // double-click:$ (starts measurement) (sets selected if set
> > picking SELECT)
> > //
> > // # all actions involve whole molecules unless set allowMoveAtoms
> > TRUE
> > // ^ set picking dragSelected overrules set dragSelected
> > // * rotate requires set allowRotateSelected TRUE
> > // $ set dragSelected allows setting of a new molecule with
> > double-click when set picking SELECT
> > // $ set picking dragSelected allows measurements with
> double-click, as
> > usual
> >
> Bob, thank you very much for the explanations. It is much clearer now.
>
> You havn't mentioned yet 'set pickingStyle' which additionally modifies
> the behaviour.
> For example with 'set picking dragSelected', "z-shift" and "rotate"
> don't work together with 'set pickingStyle drag select'. Instead
> "shift-drag" and "alt-drag" start a selection rubberband. With 'set
> pickingStyle select toggle', "z-shift" and "rotate" do work.
>
> Considering all the information I gathered so far, the following three
> option sets are more or less suitable for moving around selected atoms
> independent of their connectivity in Jmol 14.3.13:
>
> ==== Option Set 1 ================
> set allowMoveAtoms on;
> set allowRotateSelected on;
> set picking dragSelected;
> set pickingStyle select toggle;
> set dragSelected off;
>
> ---- Mouse Behaviour Option Set 1 ---
> x/y-shift selected: drag (any atom)
> z-shift selected: shift-drag (any atom)
> rotate selected: alt-drag (any atom)
> select single atom: [not available]
> deselect single atom: [not available]
> select multiple atoms: [not available]
> deselect multiple atoms: [not available]
>
> ==== Option Set 2 ================
> set allowMoveAtoms on;
> set allowRotateSelected on;
> set picking dragSelected;
> set pickingStyle select drag;
> set dragSelected off;
>
> ---- Mouse Behaviour Option Set 2 ---
> x/y-shift selected: drag (any atom)
> z-shift selected: [not available]
> rotate selected: [not available]
> select single atom: shift-drag (around unselected atom),
> alt-drag (around atom)
> deselect single atom: shift-drag (around selected atoms)
> select multiple atoms: shift-drag (around unselected atoms),
> alt-drag (around atoms)
> deselect multiple atoms: shift-drag (around selected atoms)
>
> ==== Option Set 3 ================
> set allowMoveAtoms on;
> set allowRotateSelected on;
> set picking atom;
> set pickingStyle select toggle;
> set dragSelected on;
>
> ---- Mouse Behaviour Option Set 3 ---
> x/y-shift selected: shift-alt-drag (anywhere)
> z-shift selected: [not available]
> rotate selected: alt-drag (anywhere)
> select single atom: click (unselected atom),
> double-click (atom, others are deselected)
> deselect single atom: click (selected atom)
> select multiple atoms: [not available]
> deselect multiple atoms: [not available]
> ==================================
>
> Set 1 totally disables mouse-based selection changes and enables all
> three movement types (x/y-shift, z-shift, rotate).
>
> Set 2 enables mouse-based single/multiple atom selection changes and
> enables only one movement type (x/y-shift).
>
> Set 3 enables mouse-based single atom selection changes and enables two
> movement types (x/y-shift, rotate).
>
> Regards,
> Rolf
>
> --
>
> Rolf Huehne
> Postdoc
>
> Leibniz Institute for Age Research - Fritz Lipmann Institute (FLI)
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> 07745 Jena, Germany
>
> Phone: +49 3641 65 6205
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>
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--
Robert M. Hanson
Larson-Anderson Professor of Chemistry
Chair, Department of Chemistry
St. Olaf College
Northfield, MN
http://www.stolaf.edu/people/hansonr
If nature does not answer first what we want,
it is better to take what answer we get.
-- Josiah Willard Gibbs, Lecture XXX, Monday, February 5, 1900
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