Hi Josep, As a stopgap I'll implement the automatic writing of these run KARs to disk in KeplerData/ for you in trunk (not 2.0), it shouldn't be too hard.
Derik On Mar 15, 2010, at 2:00 PM, Derik Barseghian wrote: > I believe how it works right now is that if you're not uploading to > the repository, no KAR is generated. Reporting artifacts are > serialized to disk, but as temporary files that get deleted on exit > (this is easily changed by removing deleteOnExit calls in > ReportingListener writeFiles()). > > If you are uploading to a repository, in addition to the temporary > reporting artifacts, a temporary KAR is generated that is uploaded, > and then also deleted on exit. > > I agree with Chad's email in the other thread that we should expand > command line control capabilities, and that it should be up to the > user if and where they want to serialize their results. And we > should definitely allow the generation of resultant KARs to disk > without upload. Chad's entered an enhancement request that we can > work on: > http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4883 > > Derik > > > On Mar 15, 2010, at 11:52 AM, Josep Morer Mu?oz wrote: > >> I agree with you Matt. In my case, it will be enough if I can get >> the run KAR and store it in the filesystem. >> >> Is there any way to get the run KAR without the GUI? As I >> understand it is not implemented yet. >> >> Thanks >> >> On 15 March 2010 19:28, Matt Jones <jones at nceas.ucsb.edu> wrote: >> Seems to me that it should go in KeplerData, under whichever local >> file system repository has been configured for KAR outputs. I had >> been under the impression that this was already the case, but >> maybe I'm mistaken. Aaron or Derik can probably clarify. >> >> Matt >> >> >> 2010/3/15 ben leinfelder <leinfelder at nceas.ucsb.edu> >> Josep, >> You raise a good point - when running from the command line script, >> the "products" of the KAR execution are not made available - at >> least not in a direct way. We've been building the command line >> feature so that the results of the KAR/workflow run (i.e. the >> report) would be packaged in a "run KAR" along with the workflow >> and report layout and that KAR would be uploaded to a remote >> repository along with some metadata that described the content of >> the run KAR. >> In your case, you just want the run KAR to be available on your >> local filesystem. >> Do you have suggestions as to where the run KAR should be placed >> once execution has wrapped up and the KAR is built? >> -ben >> >> >> On Mar 15, 2010, at 10:58 AM, Josep Morer Mu?oz wrote: >> >> Thanks Ben. >> >> I have been switched to wrp suite and it seems it works. Now, using >> the workflow run manager, I can save the KAR which contains a PDF >> that is generated using the run selected. >> >> However, I would like to generate this PDF for every run that is >> executed using "kepler.sh workflow.kar -runwf -nogui". When I save >> a KAR, it only contains the workflow and the report layout. If I >> execute it, neither the workflow run XML nor the PDF file, appeared >> in the KAR. When are they generated? I am trying to automatize all >> the process using the command line execution and extract the PDF >> from the KAR (or whatever place is generated). >> >> Thanks for your help >> >> >> >> 2010/3/15 ben leinfelder <leinfelder at nceas.ucsb.edu> >> Josep - >> Please use the 'wrp' suite instead of the 'reporting' module. >> Thanks, >> -ben >> >> >> On Mar 13, 2010, at 3:53 AM, Josep Morer Mu?oz wrote: >> >> I have updated kepler using "ant update" and I have noticed that >> reporting designer view has disappeared. It has been moved into >> another module or something similar? >> >> I have downloaded all project another time using this following >> commads: >> >> mkdir KeplerLast >> cd KeplerLast >> svn co https://code.kepler-project.org/code/kepler/trunk/modules/build-area >> cd build-area >> >> ant change-to -Dsuite=reporting >> >> Now, it seems that when I execute kepler.sh, the reporting module >> is initialized but no reporting designer view appears in the GUI. >> >> urops at urops-laptop:~/KeplerLast$ ./kepler.sh >> [null] /home/urops/KeplerLast >> [null] Found OS Extension file: /home/urops/KeplerLast/apple- >> extensions/module-info/osextension.txt >> [null] Building Kars... >> [null] Ran additional initialization for module gui from class >> org.kepler.module.gui.Initialize >> [null] Ran additional initialization for module tagging from >> class org.kepler.module.tagging.Initialize >> [null] Ran additional initialization for module provenance from >> class org.kepler.module.provenance.Initialize >> [null] common tabpane configuration overridden by reporting >> [null] Ran additional initialization for module reporting from >> class org.kepler.module.reporting.Initialize >> [null] /usr/share/themes/Human/gtk-2.0/gtkrc:51: error: lexical >> error or unexpected token, expected valid token >> [null] Kepler Initializing... >> [null] *** Attempting to get ResourceBundle for SVG defaults *** >> [null] *** svgRenderingMethod = SVG_BATIK_RENDERING *** >> >> >> I am probably missing something... Could you help me? >> >> -- >> Josep >> _______________________________________________ >> Kepler-users mailing list >> Kepler-users at kepler-project.org >> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users >> >> >> >> >> -- >> Josep >> >> _______________________________________________ >> Kepler-users mailing list >> Kepler-users at kepler-project.org >> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users >> >> >> >> >> -- >> Josep >> _______________________________________________ >> Kepler-users mailing list >> Kepler-users at kepler-project.org >> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users > > ---------- > Derik Barseghian > http://nceas.ucsb.edu/ecoinfo | office: 805-893-5127 > Rm 3411, Marine Science Research Building, UCSB > Santa Barbara, CA, 93106-6150 > > _______________________________________________ > Kepler-users mailing list > Kepler-users at kepler-project.org > http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users
