Thanks Derik! I will test your modification and let you the results. 2010/3/15 Derik Barseghian <barseghian at nceas.ucsb.edu>
> Hi Josep, > > I've done this in r23358, the resultant kars are now written into > KeplerData/workflow-runs/. Hope this helps. > > Derik > > > > On Mar 15, 2010, at 2:25 PM, Derik Barseghian wrote: > > Hi Josep, >> >> As a stopgap I'll implement the automatic writing of these run KARs to >> disk in KeplerData/ for you in trunk (not 2.0), it shouldn't be too hard. >> >> Derik >> >> On Mar 15, 2010, at 2:00 PM, Derik Barseghian wrote: >> >> I believe how it works right now is that if you're not uploading to the >>> repository, no KAR is generated. Reporting artifacts are serialized to disk, >>> but as temporary files that get deleted on exit (this is easily changed by >>> removing deleteOnExit calls in ReportingListener writeFiles()). >>> >>> If you are uploading to a repository, in addition to the temporary >>> reporting artifacts, a temporary KAR is generated that is uploaded, and then >>> also deleted on exit. >>> >>> I agree with Chad's email in the other thread that we should expand >>> command line control capabilities, and that it should be up to the user if >>> and where they want to serialize their results. And we should definitely >>> allow the generation of resultant KARs to disk without upload. Chad's >>> entered an enhancement request that we can work on: >>> http://bugzilla.ecoinformatics.org/show_bug.cgi?id=4883 >>> >>> Derik >>> >>> >>> On Mar 15, 2010, at 11:52 AM, Josep Morer Mu?oz wrote: >>> >>> I agree with you Matt. In my case, it will be enough if I can get the >>>> run KAR and store it in the filesystem. >>>> >>>> Is there any way to get the run KAR without the GUI? As I understand it >>>> is not implemented yet. >>>> >>>> Thanks >>>> >>>> On 15 March 2010 19:28, Matt Jones <jones at nceas.ucsb.edu> wrote: >>>> Seems to me that it should go in KeplerData, under whichever local file >>>> system repository has been configured for KAR outputs. I had been under >>>> the >>>> impression that this was already the case, but maybe I'm mistaken. Aaron >>>> or Derik can probably clarify. >>>> >>>> Matt >>>> >>>> >>>> 2010/3/15 ben leinfelder <leinfelder at nceas.ucsb.edu> >>>> Josep, >>>> You raise a good point - when running from the command line script, the >>>> "products" of the KAR execution are not made available - at least not in a >>>> direct way. We've been building the command line feature so that the >>>> results >>>> of the KAR/workflow run (i.e. the report) would be packaged in a "run KAR" >>>> along with the workflow and report layout and that KAR would be uploaded to >>>> a remote repository along with some metadata that described the content of >>>> the run KAR. >>>> In your case, you just want the run KAR to be available on your local >>>> filesystem. >>>> Do you have suggestions as to where the run KAR should be placed once >>>> execution has wrapped up and the KAR is built? >>>> -ben >>>> >>>> >>>> On Mar 15, 2010, at 10:58 AM, Josep Morer Mu?oz wrote: >>>> >>>> Thanks Ben. >>>> >>>> I have been switched to wrp suite and it seems it works. Now, using the >>>> workflow run manager, I can save the KAR which contains a PDF that is >>>> generated using the run selected. >>>> >>>> However, I would like to generate this PDF for every run that is >>>> executed using "kepler.sh workflow.kar -runwf -nogui". When I save a KAR, >>>> it >>>> only contains the workflow and the report layout. If I execute it, neither >>>> the workflow run XML nor the PDF file, appeared in the KAR. When are they >>>> generated? I am trying to automatize all the process using the command line >>>> execution and extract the PDF from the KAR (or whatever place is >>>> generated). >>>> >>>> Thanks for your help >>>> >>>> >>>> >>>> 2010/3/15 ben leinfelder <leinfelder at nceas.ucsb.edu> >>>> Josep - >>>> Please use the 'wrp' suite instead of the 'reporting' module. >>>> Thanks, >>>> -ben >>>> >>>> >>>> On Mar 13, 2010, at 3:53 AM, Josep Morer Mu?oz wrote: >>>> >>>> I have updated kepler using "ant update" and I have noticed that >>>> reporting designer view has disappeared. It has been moved into another >>>> module or something similar? >>>> >>>> I have downloaded all project another time using this following commads: >>>> >>>> mkdir KeplerLast >>>> cd KeplerLast >>>> svn co >>>> https://code.kepler-project.org/code/kepler/trunk/modules/build-area >>>> cd build-area >>>> >>>> ant change-to -Dsuite=reporting >>>> >>>> Now, it seems that when I execute kepler.sh, the reporting module is >>>> initialized but no reporting designer view appears in the GUI. >>>> >>>> urops at urops-laptop:~/KeplerLast$ ./kepler.sh >>>> [null] /home/urops/KeplerLast >>>> [null] Found OS Extension file: >>>> /home/urops/KeplerLast/apple-extensions/module-info/osextension.txt >>>> [null] Building Kars... >>>> [null] Ran additional initialization for module gui from class >>>> org.kepler.module.gui.Initialize >>>> [null] Ran additional initialization for module tagging from class >>>> org.kepler.module.tagging.Initialize >>>> [null] Ran additional initialization for module provenance from class >>>> org.kepler.module.provenance.Initialize >>>> [null] common tabpane configuration overridden by reporting >>>> [null] Ran additional initialization for module reporting from class >>>> org.kepler.module.reporting.Initialize >>>> [null] /usr/share/themes/Human/gtk-2.0/gtkrc:51: error: lexical error >>>> or unexpected token, expected valid token >>>> [null] Kepler Initializing... >>>> [null] *** Attempting to get ResourceBundle for SVG defaults *** >>>> [null] *** svgRenderingMethod = SVG_BATIK_RENDERING *** >>>> >>>> >>>> I am probably missing something... Could you help me? >>>> >>>> -- >>>> Josep >>>> _______________________________________________ >>>> Kepler-users mailing list >>>> Kepler-users at kepler-project.org >>>> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users >>>> >>>> >>>> >>>> >>>> -- >>>> Josep >>>> >>>> _______________________________________________ >>>> Kepler-users mailing list >>>> Kepler-users at kepler-project.org >>>> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users >>>> >>>> >>>> >>>> >>>> -- >>>> Josep >>>> _______________________________________________ >>>> Kepler-users mailing list >>>> Kepler-users at kepler-project.org >>>> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users >>>> >>> >>> ---------- >>> Derik Barseghian >>> http://nceas.ucsb.edu/ecoinfo | office: 805-893-5127 >>> Rm 3411, Marine Science Research Building, UCSB >>> Santa Barbara, CA, 93106-6150 >>> >>> _______________________________________________ >>> Kepler-users mailing list >>> Kepler-users at kepler-project.org >>> http://mercury.nceas.ucsb.edu/kepler/mailman/listinfo/kepler-users >>> >> >> > -- Josep -------------- next part -------------- An HTML attachment was scrubbed... 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