On 4 Oct 2007, at 12:20, Alessandra Bilardi wrote:
Hi Arek,
Thank you for yuor replay.
I tested other dataset tables and I obtain sql script running without
errors. Now, I will select best tables that they content our queries
and
create ad hoc sql script by MBuilder.
out of space. This sounds more like a bug to me. Would you be able to
give us your database dump so we could have
a look and recreate the problem here?
If you have to follow this linux comands you have to obtain "no space
on
device" error:
$ curl -O http://sgdlite.princeton.edu/download/sgdlite/sgdlite.sql.gz
$ createdb sgdlite
$ (gunzip -c sgdlite.sql.gz | psql -d sgdlite -f - ) >& log.load
$ bin/martbuilder.sh
schema is chado about sgdlite database
dataset is composed "feature" table and its group tables
save sql script as sgdlite_mart.sql
$ psql -d sgdlite < sgdlite_mart.sql 2> sgdlite_mart.err
My free disk space was 20Gb.
Regards,
Alessandra Bilardi
thanks for the info Alessandra
we'll have a look and get back to you on this
a.
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CRIBI, University of Padova, Italy |
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Arek Kasprzyk
EMBL-European Bioinformatics Institute.
Wellcome Trust Genome Campus, Hinxton,
Cambridge CB10 1SD, UK.
Tel: +44-(0)1223-494606
Fax: +44-(0)1223-494468
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