Hi Joachim,
Further to Junjun's reply, if you want to add more species (e.g
hsapiens_gene_vega or mmusculus_gene_vega) to an existing single
template (e.g gene_vega), you need to use MartEditor's key combination
Alt+N and then make appropriate selection.
Hope this helps,
Syed
Junjun Zhang wrote:
Hi Joachim,
It's not entirely clear what you wish to achieve, but I am under the impression
that you want to merge 'hsapiens_gene_vega' and 'mmusculus_gene_vega' into one
dataset. If this is the case, you can not do it by changing configuration in
MartEditor, the two datasets ('hsapiens_gene_vega' and 'mmusculus_gene_vega')
have to be physically merged, which should be fairly easy to do. Let us know if
you need help with that.
Hope this helps.
Junjun
-----Original Message-----
From: [email protected]
[mailto:[email protected]] On Behalf Of Joachim Baran
Sent: Sunday, July 19, 2009 9:20 AM
To: [email protected]
Subject: [mart-dev] Creating a single dataset for multiple species
Hello!
How do I create my own dataset (for example for the Vega
Mart) in MartEditor?
As it says in the documentation, I use the 'Naive' menu item
to construct the rudimentary entries, but the first
dialog-box only lets me choose a dataset per species. For
example, the Vega Mart dataset is represented as
'hsapiens_gene_vega' and 'mmusculus_gene_vega', which is
different to the single dataset 'gene_vega' of the Vega Mart
on martdb.ensembl.org. I would like to have a single entry
for my dataset regardless of the species as well, but I do
not know how to do this in MartEditor.
Thanks,
Joachim
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