Hello, 2009/7/20 Junjun Zhang <[email protected]>: > As Syed pointed out earlier on, you start with one species by run Naïve and > Export the naïve configure to the database, > and then "Alt-N" to bring in the other species. When prompted with the > question "Create new template rather than use > existing one?", ask "No". After this, a template configure will be created. > When you expend the "PartitionTable: Datasets" > node in the left tree panel, you should be able to see two "Partition", one > for each species. Don't forget to do "Export" again. > From now on, you should be able to make changes to the configuration, and the > changes will be propagate to the two species. > Follow the same process to add more species as you need. Adding the species worked fine and I do indeed see several datasets in the tree on the left-hand side in MartEditor now. However, after exporting and running 'perl bin/configure.pl --clean -r conf/myMart.xml' again, I do not see the added species in the selection box '- CHOOSE DATASET -' in the BioMart web-interface. The selection box only contains the choice 'my ensembl', which corresponds to the name that I have chosen for the template in MartEditor. In fact, when I choose this entry, the data I can query seems to correspond to the first species for which I have run 'Naive' in MartEditor first.
How do I make the other species appear in that selection box as well? Thanks, Joachim -- B.1079 Michael Smith Building Faculty of Life Sciences The University of Manchester Oxford Road Manchester M13 9PT United Kingdom
