Hello all,
I want to do domain mapping of my protein of intrest for testing its
interaction with a  few predicted interactors. I have generated
N-termius end and C-terminus end of my protein. I have cloned
approx150 bp both the terminii in pET28a vector between Nde1 and EcoRI
sites(both the constructs). I tried inducing the protein in BL-21DE3
cells using but no success. The full length protein expresses normally
without any problem in a different vector backbone(infact gives a big
blob of pure protein in induced cells) . I am wondering what went
wrong. I have sent my  plasmid samples for sequencing and  awaiting
for results. The constructs were PCR amplified using Pfu
polymerase(very less chances of errors in PCR product). Since I have
done directional cloning chances of frameshift is also less. I tried
for presence of inserts using both colony PCR and plasmid as template
both methods show presence of template of correct size. I was
wondering if anybody has expressed protein of similar size. Is it
getting degraded. Please help me in this regard.

-- 
Rao Venkatramanan G.
Research Scholar
UM-DAE-CBS
Mumbai University campus,
Kalina, Santacruz
Mumbai-400098

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