The mysql_upgrade errors look like the mysql command line client can't be 
located by the script... some kind of path error induced by a security "fix" 
I'm thinking

 

On 02/12/2015 12:37 PM, Cameron Mann wrote:
> Hi all,
>
> I've encountered a problem with MySQL 5.6.23 on CentOS 7.0 and would
> greatly appreciate any advice on what to do next.
>
> Synopsis:
>
> 1. Fresh install of CentOS 7.0 using minimal install ISO
> 2. yum update -y
> 3. rpm -i http://dev.mysql.com/get/mysql-community-release-el7-5.noarch.rpm
> 4. yum install mysql-community-server -y
> 5. service mysqld start
>
> After installing mysql-community-server 5.6.23 on a fresh minimal
> install of CentOS 7.0 (running in VirtualBox 4.3.20) it will fail to
> start with the following error:
>
> $ sudo service mysqld start
> Redirecting to /bin/systemctl start  mysqld.service
> Job for mysqld.service failed. See 'systemctl status mysqld.service'
> and 'journalctl -xn' for details.
>
> $ systemctl status mysqld.service
> mysqld.service - MySQL Community Server
>    Loaded: loaded (/usr/lib/systemd/system/mysqld.service; enabled)
>    Active: activating (start-post) since Thu 2015-02-12 20:07:08 UTC;
> 1min 30s ago
>   Process: 5643 ExecStart=/usr/bin/mysqld_safe (code=exited, status=0/SUCCESS)
>   Process: 5632 ExecStartPre=/usr/bin/mysql-systemd-start pre
> (code=exited, status=0/SUCCESS)
>  Main PID: 5643 (code=exited, status=0/SUCCESS);         : 5644
> (mysql-systemd-s)
>    CGroup: /system.slice/mysqld.service
>            └─control
>              ├─5644 /bin/bash /usr/bin/mysql-systemd-start post
>              └─6115 sleep 1
>
> Snippet from mysqld.log:
> 150212 19:47:08 mysqld_safe Starting mysqld daemon with databases from
> /var/lib/mysql
> 2015-02-12 19:47:08 0 [Warning] TIMESTAMP with implicit DEFAULT value
> is deprecated. Please use --explicit_defaults_for_timestamp server
> option (see documentation for more details).
> 2015-02-12 19:47:08 1244 [Warning] Buffered warning: Changed limits:
> max_open_files: 1024 (requested 5000)
> 2015-02-12 19:47:08 1244 [Warning] Buffered warning: Changed limits:
> table_cache: 431 (requested 2000)
> 2015-02-12 19:47:08 1244 [Note] Plugin 'FEDERATED' is disabled.
> /usr/sbin/mysqld: Table 'mysql.plugin' doesn't exist
> 2015-02-12 19:47:08 1244 [ERROR] Can't open the mysql.plugin table.
> Please run mysql_upgrade to create it.
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Using atomics to ref count
> buffer pool pages
> 2015-02-12 19:47:08 1244 [Note] InnoDB: The InnoDB memory heap is disabled
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Mutexes and rw_locks use GCC
> atomic builtins
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Memory barrier is not used
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Compressed tables use zlib 1.2.3
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Using Linux native AIO
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Using CPU crc32 instructions
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Initializing buffer pool, size = 
> 128.0M
> 2015-02-12 19:47:08 1244 [Note] InnoDB: Completed initialization of buffer 
> pool
> InnoDB: Error: pthread_create returned 13
> 150212 19:47:08 mysqld_safe mysqld from pid file
> /var/run/mysqld/mysqld.pid ended
>
> The suggested mysql_upgrade command gives the following output:
>
> $ mysql_upgrade
> Looking for 'mysql' as: mysql
> Looking for 'mysqlcheck' as: mysqlcheck
> FATAL ERROR: Upgrade failed
>
> $ mysql_upgrade -uroot --password=""
> Warning: Using a password on the command line interface can be insecure.
> Looking for 'mysql' as: mysql
> Looking for 'mysqlcheck' as: mysqlcheck
> FATAL ERROR: Upgrade failed
>
> I've also observed the same behaviour on a CentOS 7.0 image (I believe
> from http://cloud.centos.org) running in OpenStack under the KVM
> hypervisor. I have not been able to test in a non-virtualized
> environment.
>
> I've attempted rebooting before and after installation of
> mysql-community-server to no effect.
>
> Previous versions of 5.6.x appear unaffected.
>
> Cameron Mann
>


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