See <https://builds.apache.org/job/ctakes-trunk-compiletest/1129/display/redirect?page=changes>
Changes: [alexz] CTAKES-479: skip testCPE when UMLS credentials not exported as env vars ------------------------------------------ [...truncated 549.99 KB...] found: List <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[302,64] [unchecked] unchecked conversion [ERROR] required: List<Element> found: List <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[75,75] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[76,78] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[77,76] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[78,74] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[80,36] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration location: class UmlsDictionaryLookupAnnotator <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[133,13] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration location: class UmlsDictionaryLookupAnnotator <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[135,13] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration location: class UmlsDictionaryLookupAnnotator <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/strtable/FieldConstraintImpl.java>:[60,41] [unchecked] unchecked call to compareTo(T) as a member of the raw type Comparable [ERROR] where T is a type-variable: T extends Object declared in interface Comparable <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[266,15] [unchecked] unchecked call to put(K,V) as a member of the raw type Map [ERROR] where K,V are type-variables: K extends Object declared in interface Map V extends Object declared in interface Map <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,19] [unchecked] unchecked method invocation: method sort in class Collections is applied to given types [ERROR] required: List<T>,Comparator<? super T> found: List,OffsetComparator where T is a type-variable: T extends Object declared in method <T>sort(List<T>,Comparator<? super T>) <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,20] [unchecked] unchecked conversion [ERROR] required: List<T> found: List where T is a type-variable: T extends Object declared in method <T>sort(List<T>,Comparator<? super T>) <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java>:[94,34] [deprecation] open(Directory) in IndexReader has been deprecated [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[47,88] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[48,88] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[49,86] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[50,90] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[51,31] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration location: class ThreadedUmlsDictionaryLookupAnnotator <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,45] [unchecked] unchecked method invocation: method organizeByOffset in class BaseLookupConsumerImpl is applied to given types [ERROR] required: Iterator<LookupHit> found: Iterator <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,46] [unchecked] unchecked conversion [ERROR] required: Iterator<LookupHit> found: Iterator <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/algorithms/FirstTokenPermutationImpl.java>:[213,44] [unchecked] unchecked conversion [INFO] 28 errors [INFO] ------------------------------------------------------------- [JENKINS] Archiving disabled [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary: [INFO] [INFO] Apache cTAKES ..................................... SUCCESS [4.412s] [INFO] ctakes-gui-res .................................... SUCCESS [3.661s] [INFO] Apache cTAKES Resources core ...................... SUCCESS [2.309s] [INFO] Apache cTAKES common type system .................. SUCCESS [7.880s] [INFO] Apache cTAKES utils ............................... SUCCESS [3.402s] [INFO] Apache cTAKES core ................................ SUCCESS [22.913s] [INFO] ctakes-gui ........................................ SUCCESS [3.852s] [INFO] Apache cTAKES Resources pos-tagger ................ SUCCESS [2.399s] [INFO] Apache cTAKES part-of-speech tagger ............... SUCCESS [4.732s] [INFO] Apache cTAKES Resources ctakes-chunker-res ........ SUCCESS [2.304s] [INFO] Apache cTAKES chunker ............................. SUCCESS [3.291s] [INFO] Apache cTAKES document preprocessor ............... SUCCESS [3.697s] [INFO] Apache cTAKES Resources dictionary-lookup ......... SUCCESS [9.836s] [INFO] Apache cTAKES dictionary lookup ................... FAILURE [2.779s] [INFO] Apache cTAKES context dependent tokenizer ......... SKIPPED [INFO] Apache cTAKES Resources lvg ....................... SKIPPED [INFO] Apache cTAKES LVG lexical tools ................... SKIPPED [INFO] Apache cTAKES Resources ne-contexts ............... SKIPPED [INFO] Apache cTAKES named entity contexts ............... SKIPPED [INFO] Apache cTAKES Resources constituency-parser ....... SKIPPED [INFO] Apache cTAKES Constituency Parser ................. SKIPPED [INFO] Apache cTAKES Resources coreference ............... SKIPPED [INFO] Apache cTAKES Resources temporal .................. SKIPPED [INFO] Apache cTAKES Resources relation-extractor ........ SKIPPED [INFO] Apache cTAKES Resources dictionary-lookup-fast-res SKIPPED [INFO] Apache cTAKES dictionary lookup fast .............. SKIPPED [INFO] Apache cTAKES Resources assertion ................. SKIPPED [INFO] Apache cTAKES Resources dependency-parser ......... SKIPPED [INFO] Apache cTAKES Dependency Parser ................... SKIPPED [INFO] Apache cTAKES Assertion ........................... SKIPPED [INFO] ctakes-clinical-pipeline-res ...................... SKIPPED [INFO] Apache cTAKES ctakes-clinical-pipeline ............ SKIPPED [INFO] Apache cTAKES Relation Extractor .................. SKIPPED [INFO] Apache cTAKES Temporal Information Extraction ..... SKIPPED [INFO] Apache cTAKES CoReference Resolver ................ SKIPPED [INFO] Apache cTAKES Resources drug-ner .................. SKIPPED [INFO] Apache cTAKES Drug NER ............................ SKIPPED [INFO] Apache cTAKES Resources side-effect ............... SKIPPED [INFO] Apache cTAKES Side Effects ........................ SKIPPED [INFO] Apache cTAKES Resources smoking-status ............ SKIPPED [INFO] Apache cTAKES Smoking Status ...................... SKIPPED [INFO] Apache cTAKES Resources assertion-zoner ........... 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SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 1:40.044s [INFO] Finished at: Thu Nov 16 22:27:59 UTC 2017 [INFO] Final Memory: 57M/781M [INFO] ------------------------------------------------------------------------ [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] Archiving disabled [JENKINS] 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org.apache.maven.plugins:maven-compiler-plugin:2.4:compile (default-compile) on project ctakes-dictionary-lookup: Compilation failure: Compilation failure: [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[22,32] error: cannot find symbol [ERROR] symbol: class UmlsEnvironmentConfiguration [ERROR] location: package org.apache.ctakes.core.ae [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[21,32] error: cannot find symbol [ERROR] symbol: class UmlsEnvironmentConfiguration [ERROR] location: package org.apache.ctakes.core.ae [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[87,72] [unchecked] unchecked conversion [ERROR] required: List<Element> [ERROR] found: List [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[161,95] [unchecked] unchecked conversion [ERROR] required: List<Element> [ERROR] found: List [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[174,23] [unchecked] unchecked method invocation: method addExcludeList in class LookupParseUtilitiesRefactor is applied to given types [ERROR] required: DictionaryEngine,List<Element> [ERROR] found: DictionaryEngine,List [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[174,60] [unchecked] unchecked conversion [ERROR] required: List<Element> [ERROR] found: List [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[205,72] [unchecked] unchecked conversion [ERROR] required: List<Element> [ERROR] found: List [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/LookupParseUtilitiesRefactor.java>:[302,64] [unchecked] unchecked conversion [ERROR] required: List<Element> [ERROR] found: List [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[75,75] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[76,78] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[77,76] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[78,74] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[80,36] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration [ERROR] location: class UmlsDictionaryLookupAnnotator [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[133,13] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration [ERROR] location: class UmlsDictionaryLookupAnnotator [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsDictionaryLookupAnnotator.java>:[135,13] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration [ERROR] location: class UmlsDictionaryLookupAnnotator [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/strtable/FieldConstraintImpl.java>:[60,41] [unchecked] unchecked call to compareTo(T) as a member of the raw type Comparable [ERROR] where T is a type-variable: [ERROR] T extends Object declared in interface Comparable [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[266,15] [unchecked] unchecked call to put(K,V) as a member of the raw type Map [ERROR] where K,V are type-variables: [ERROR] K extends Object declared in interface Map [ERROR] V extends Object declared in interface Map [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,19] [unchecked] unchecked method invocation: method sort in class Collections is applied to given types [ERROR] required: List<T>,Comparator<? super T> [ERROR] found: List,OffsetComparator [ERROR] where T is a type-variable: [ERROR] T extends Object declared in method <T>sort(List<T>,Comparator<? super T>) [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/assertion/CreateAssertionLuceneIndexFromDelimitedFile.java>:[389,20] [unchecked] unchecked conversion [ERROR] required: List<T> [ERROR] found: List [ERROR] where T is a type-variable: [ERROR] T extends Object declared in method <T>sort(List<T>,Comparator<? super T>) [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/UmlsToSnomedLuceneConsumerImpl.java>:[94,34] [deprecation] open(Directory) in IndexReader has been deprecated [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[47,88] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[48,88] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[49,86] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[50,90] error: package UmlsEnvironmentConfiguration does not exist [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/ThreadedUmlsDictionaryLookupAnnotator.java>:[51,31] error: cannot find symbol [ERROR] symbol: variable UmlsEnvironmentConfiguration [ERROR] location: class ThreadedUmlsDictionaryLookupAnnotator [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,45] [unchecked] unchecked method invocation: method organizeByOffset in class BaseLookupConsumerImpl is applied to given types [ERROR] required: Iterator<LookupHit> [ERROR] found: Iterator [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/ae/AssertionCuePhraseConsumerImpl.java>:[96,46] [unchecked] unchecked conversion [ERROR] required: Iterator<LookupHit> [ERROR] found: Iterator [ERROR] <https://builds.apache.org/job/ctakes-trunk-compiletest/ws/ctakes-dictionary-lookup/src/main/java/org/apache/ctakes/dictionary/lookup/algorithms/FirstTokenPermutationImpl.java>:[213,44] [unchecked] unchecked conversion [ERROR] -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoFailureException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn <goals> -rf :ctakes-dictionary-lookup Sending e-mails to: [email protected] [email protected] channel stopped
