Hi Sam, looks like the XCode command line tools containing standard headers are either not installed or updated. Try xcode-select --install or manually download them from https://developer.apple.com/download/more/ and maybe uninstall/reinstall them in case updates don't work. Check with
find /Library/Developer/CommandLineTools/ -name _stdio.h which should give /Library/Developer/CommandLineTools/SDKs/MacOSX10.15.sdk/usr/include/_stdio.h (besides possible older versions of MacOSX) Best, Chris Am Sa., 9. Jan. 2021 um 03:02 Uhr schrieb Samuel Dupree < sdup...@speakeasy.net>: > I'm attempting to wrap a Fortran-77 source member library using f2py. > I'm running he Anaconda distribution for Python 3.7.6 on a Mac Pro > (2019) under Mac OS X Big Sur (ver. 11.1). The version of Xcode.app I'm > running is 12.3. The version of NumPy I'm running is 1.18.3. > > The errors I'm getting are from header files the compiler can't find as > captured in the attached log file. A sample of the kind of errors I'm > seeing are captured below. > > compile options: > '-I/var/folders/2r/4bw6nw0x58z0_ybx632_h14m0000gq/T/tmp5uemdb2k/src.macosx-10.9-x86_64-3.7 > > -I/Users/user/opt/anaconda3/lib/python3.7/site-packages/numpy/core/include > -I/Users/user/opt/anaconda3/include/python3.7m -c' > gcc: > > /var/folders/2r/4bw6nw0x58z0_ybx632_h14m0000gq/T/tmp5uemdb2k/src.macosx-10.9-x86_64-3.7/sofapymodule.c > gcc: > > /var/folders/2r/4bw6nw0x58z0_ybx632_h14m0000gq/T/tmp5uemdb2k/src.macosx-10.9-x86_64-3.7/fortranobject.c > In file included from > > /opt/local/lib/gcc10/gcc/x86_64-apple-darwin20/10.2.0/include-fixed/syslimits.h:7, > from > > /opt/local/lib/gcc10/gcc/x86_64-apple-darwin20/10.2.0/include-fixed/limits.h:34, > from > /Users/user/opt/anaconda3/include/python3.7m/Python.h:11, > from > > /var/folders/2r/4bw6nw0x58z0_ybx632_h14m0000gq/T/tmp5uemdb2k/src.macosx-10.9-x86_64-3.7/sofapymodule.c:14: > /opt/local/lib/gcc10/gcc/x86_64-apple-darwin20/10.2.0/include-fixed/limits.h:195:61: > > error: no include path in which to search for limits.h > 195 | #include_next <limits.h> /* recurse down to the real one */ > | ^ > In file included from > /Users/user/opt/anaconda3/include/python3.7m/Python.h:25, > from > > /var/folders/2r/4bw6nw0x58z0_ybx632_h14m0000gq/T/tmp5uemdb2k/src.macosx-10.9-x86_64-3.7/sofapymodule.c:14: > /opt/local/lib/gcc10/gcc/x86_64-apple-darwin20/10.2.0/include-fixed/stdio.h:78:10: > > fatal error: _stdio.h: No such file or directory > 78 | #include <_stdio.h> > | ^~~~~~~~~~ > compilation terminated. > > Any suggestions? > > Sam Dupree. > > > _______________________________________________ > NumPy-Discussion mailing list > NumPy-Discussion@python.org > https://mail.python.org/mailman/listinfo/numpy-discussion >
_______________________________________________ NumPy-Discussion mailing list NumPy-Discussion@python.org https://mail.python.org/mailman/listinfo/numpy-discussion
