|
Hi, Bernard: Unfortunately I have not been able to test
the mpiBLAST package on OSCAR 5 for several weeks, but the last time I did it
was working with Torque, but not SGE. Doug Jennewein From: Bernard Li
[mailto:[EMAIL PROTECTED] Hi Doug: Thanks for testing! Yes, currently PVM does not work under SGE
- I'm having quite a bit of problem pinpointing the exact issues so if you
figure it out, please let me know :-) Anyways, I believe the reason why tests
failed for other libraries afterwards is because one of the nodes was marked as
in the "Error" state (and therefore you no longer have enough nodes
to test...) You should be able to find that out using the command
"qhost" (it will be marked with an "E"). You should
also be able to see that via qmon in queue status. P.S. Did you have a chance to test
mpiBLAST under OSCAR 5.0? Cheers, Bernard From:
[EMAIL PROTECTED] on behalf of Jennewein, Douglas M Hello, I have been testing the 20060605 build of OSCAR5 on CentOS
4.2 i386. Installation and testing worked fine using torque, but when I
tried using SGE, the PVM (via SGE) test failed. I ran the cluster tests
again and MPICH, LAM/MPI, Open MPI, and PVM tests all failed via SGE. I set OSCAR_VERBOSE=5 and have saved my oscarinstall.log and
a typescript of the install session, but they’re both about 4MB, so I
wasn’t able to attach them to this message. Has anyone else had
problems with SGE tests? Doug Jennewein |
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