Hi Alexandre and Ricardo, I am glad to see your advances in Roassal visualization! I wonder which input formats do you plan to support?
Your relation tower can be used to visualize the crossover percentages between haplotype blocks. For example, here are some Haplotypes drawings from Haploview (http://en.wikipedia.org/wiki/Haploview) which may interest you: http://www.jnsbm.org/viewimage.asp?img=JNatScBiolMed_2012_3_2_139_101887_f13.jpg from this paper http://www.jnsbm.org/temp/JNatScBiolMed32139-5367486_145434.pdf http://www.mailund.dk/wp-content/uploads/2010/04/haplotypes.png http://www.mailund.dk/wp-content/uploads/2010/04/journal.pone_.0010207.g005.png I can send you the exported haplotypes from a study if you are interested. It contains 131 blocks which is somewhat big to attach to this list. The only problem I see is that a parser is needed to parse the Haplotype text output file, although the format should not be difficult to parse. Cheers, Hernán 2013/12/17 Alexandre Bergel <alexandre.ber...@me.com> > Hi! > > A new builder for Roassal is coming… The goal of Relation tower is to > easily visualize relations between group of elements. We had the > inspiration from the following website http://peoplemov.in/#! > > Here are some screenshots: > > https://www.facebook.com/media/set/?set=a.559114290841839.1073741837.340543479365589&type=3 > > If you like these screenshots, then you know where the like button is :-) > > We will have this visualization on the web, thanks to our smooth and nice > Pharo2Amber migration process. > > Any idea on how to extend/apply Relation tower? Any set of data you want > us to play with? Your data? > Feedback are very welcome! > > Cheers, > Ricardo & Alexandre > > -- > _,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;: > Alexandre Bergel http://www.bergel.eu > ^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;._,.;:~^~:;. > > >
