For the time being, I have uploaded the JPEG
and GIF versions of the Ontology in UML. ---Vipul From: William Bug
[mailto:[EMAIL PROTECTED] Many thanks, Vipul. I think this is a nice, concrete start and will certainly provide a
solid foundation for discussion as we move forward - as will the Design Issues
page you've created. If it's OK, I'd like to make a small request re: the UML file. I
see MS has created an XMI export feature for Visio (http://www.microsoft.com/downloads/details.aspx?FamilyID=3DD3F3BE-656D-4830-A868-D0044406F57D&displaylang=en).
Would it be possible for you to export the UML from Visio in XMI format?
This way I'll be able to use one of several open source modeling tools that use
XMI as there persistence file format. I assume I'm not the only one on
the list without a copy of Visio on hand. I expect there may be some
associations that don't translate perfectly, but as it now stands, I'm not able
to take advantage of the fruit's of your labor. As a side note, I often
provide a PNG version when distributing models, just so others who either don't
have the tools or the knowledge of how to use open source equivalents can at
least view the model in a web browser. Many thanks again. I think it will be immensely helpful to have
made this concrete step forward. It also provides the BioRDF WG an
opportunity to comment on how this ontology will mesh with the requirements
they've been identifying for the Parkinsonian Syndrome-related data sources. Cheers, Bill On Sep 4, 2006, at 10:43 PM, Kashyap, Vipul wrote:
BIONT Teleconference on Tuesday, 5th September from 11:00am
– 12:00pm US Eastern Phone: +1 617 761 6200,
conference 24668 ("BIONT") IRC
irc://irc.w3.org:6665/hcls Browser-based IRC
client: http://www.w3.org/2001/01/cgi-irc Agenda: We will discuss the
initial “seed ontology” for the Bench to Bedside Ontology This is based on the use
case specification available at: http://esw.w3.org/topic/HCLS/ParkinsonUseCase We will focus on the
Cellular and Molecular Biologist view. The seed ontology is
available at: http://esw.w3.org/topic/HCLS/OntologyTaskForce/SeedOntology The seed ontology in the
UML format (Visio File) is available at: http://esw.w3.org/topic/HCLS/OntologyTaskForce/SeedOntology?action=""> A discussion of Design
Choices and other issues is available at: http://esw.w3.org/topic/HCLS/OntologyTaskForce/DesignIssues Cheers, ---Vipul ======================================= Vipul Kashyap, Ph.D. Senior Medical
Informatician Clinical Informatics
R&D, Partners HealthCare System Phone: (781)416-9254 Cell: (617)943-7120 http://www.partners.org/cird/AboutUs.asp?cBox=Staff&stAb=vik To keep up you need the
right answers; to get ahead you need the right questions ---John Browning and
Spencer Reiss, Wired 6.04.95
Bill Bug Senior Research Analyst/Ontological
Engineer Laboratory for
Bioimaging & Anatomical Informatics www.neuroterrain.org Department of
Neurobiology & Anatomy 215 991 8430 (ph) 610 457 0443 (mobile) 215 843 9367 (fax) Please Note: I now
have a new email - [EMAIL PROTECTED]
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- [BIONT] Teleconference on Tuesday, 5th September 2006 Kashyap, Vipul
- Re: [BIONT] Teleconference on Tuesday, 5th September... William Bug
- RE: [BIONT] Teleconference on Tuesday, 5th Septe... Donald Doherty
- RE: [BIONT] Teleconference on Tuesday, 5th September... Kashyap, Vipul
- RE: [BIONT] Teleconference on Tuesday, 5th September... Kashyap, Vipul
- RE: [BIONT] Teleconference on Tuesday, 5th September... Kashyap, Vipul
- Re: [BIONT] Teleconference on Tuesday, 5th Septe... Holger Knublauch
- RE: [BIONT] Teleconference on Tuesday, 5th Septe... Xiaoshu Wang