Has anyone had sucess running pymol "remotely", like from another program on the same system?

I'd love to be able to dynamically display output of my C++ program through pymol. Embedding the entire pymol interpreter in my program seems like an unwieldy solution. I've tried starting pymol from my C++ code, with my program feeding into pymol via a standard UNIX pipe, but as pymol doesn't seem to use STDIN/STDOUT, this doesn't work.

Thanks for any and all help,

Josh

(I'm using i86 Linux/Fedora core 1)

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