You can save a copy of the original and then superimpose the copy back onto it
# using "fab" command from the latest 1.2 beta to create poly-ala
fab AAAAAAA, pol
# create copy of the polymer
create copy, pol
# adjust a torsion
set_dihedral pol///4/N, pol///4/CA, pol///4/C, pol///5/N, 60
# superimpose back on the original copy
fit pol, copy
Cheers,
Warren
________________________________
From: Vivek Ranjan [mailto:vran...@gmail.com]
Sent: Tue 6/2/2009 10:57 AM
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] reorienting a chain
Hello,
I have a long chain of polymer. Once I change some dihedral angles, it
orients in a different direction. I would like the chain to be
reoriented in the same direction as it initially was. Is it possible
within pymol ? How can I achieve this ?
--
Thank you and Regards,
Vivek Ranjan
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------------------------------------------------------------------------------
OpenSolaris 2009.06 is a cutting edge operating system for enterprises
looking to deploy the next generation of Solaris that includes the latest
innovations from Sun and the OpenSource community. Download a copy and
enjoy capabilities such as Networking, Storage and Virtualization.
Go to: http://p.sf.net/sfu/opensolaris-get
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