Hi Julio, > I'm using PyMOL 1.3 and I would like to select one specific part of the > molecule based on a peptide sequence that it is presented in protein. Is > there any way to select subsequences in PyMOL? > > Protein sequence: > > ...SMVADLTQATFTKEGKTQKVVDVLDHDYVFDTFFK... > > Peptide: > > GKTQKV
Use the 'ps.' (peptide sequence) modifier: select targetSeq, ps. GKTQKV Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
