The error I get is from the following command:
super 1A9U, mesh
ExecutiveAlign: invalid selections for alignment.
I think that the problem is that I try to align the mesh points with
an protein.
In my understanding, I need this one to run the get_object matrix command.
Or do I understand something in the wrong manner??
Zitat von Troels Emtekær Linnet <tlin...@gmail.com>:
> Can you provide the error message?
>
>
>
> 2011/8/25 Bjoern-oliver Gohlke <
> bjoern-oliver.goh...@student.uni-tuebingen.de>
>
>> Hi,
>>
>> I actual try to get the coordinates of the mesh from a protein/selection.
>>
>> At first I run the following command:
>> open("pymol.mesh","w").write( cmd.get_povray()[1] )
>>
>> There I get points shifted by one axis or something like that.
>> Then somebody here from the mailinglist tells me that I have to use
>> cmd.get_object_matrix.
>> I read in the Wiki how to use this command.
>> (http://www.pymolwiki.org/index.php/Get_object_matrix)
>> But when I try to run the example with my points and the protein I
>> always get an error.
>> Can sombody help me, or tell me what I do wrong??
>>
>> Thanks in advance,
>> Björn
>>
>>
>>
>> ------------------------------------------------------------------------------
>> EMC VNX: the world's simplest storage, starting under $10K
>> The only unified storage solution that offers unified management
>> Up to 160% more powerful than alternatives and 25% more efficient.
>> Guaranteed. http://p.sf.net/sfu/emc-vnx-dev2dev
>> _______________________________________________
>> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
>> Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
>
------------------------------------------------------------------------------
EMC VNX: the world's simplest storage, starting under $10K
The only unified storage solution that offers unified management
Up to 160% more powerful than alternatives and 25% more efficient.
Guaranteed. http://p.sf.net/sfu/emc-vnx-dev2dev
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
