Check this, and tell if it works.
http://pymolwiki.org/index.php/Matrix_Copy
Troels Emtekær Linnet
Karl-Liebknecht-Straße 53, 2 RE <http://maps.google.dk/>
04107 Leipzig, Tyskland
Mobil: +49 1577-8944752
2011/8/25 Bjoern-oliver Gohlke <
bjoern-oliver.goh...@student.uni-tuebingen.de>
> The error I get is from the following command:
> super 1A9U, mesh
> ExecutiveAlign: invalid selections for alignment.
>
> I think that the problem is that I try to align the mesh points with an
> protein.
> In my understanding, I need this one to run the get_object matrix command.
> Or do I understand something in the wrong manner??
>
>
> Zitat von Troels Emtekær Linnet <tlin...@gmail.com>:
>
>
> Can you provide the error message?
>>
>>
>>
>> 2011/8/25 Bjoern-oliver Gohlke <
>> bjoern-oliver.gohlke@student.**uni-tuebingen.de<bjoern-oliver.goh...@student.uni-tuebingen.de>
>> >
>>
>> Hi,
>>>
>>> I actual try to get the coordinates of the mesh from a protein/selection.
>>>
>>> At first I run the following command:
>>> open("pymol.mesh","w").write( cmd.get_povray()[1] )
>>>
>>> There I get points shifted by one axis or something like that.
>>> Then somebody here from the mailinglist tells me that I have to use
>>> cmd.get_object_matrix.
>>> I read in the Wiki how to use this command.
>>> (http://www.pymolwiki.org/**index.php/Get_object_matrix<http://www.pymolwiki.org/index.php/Get_object_matrix>
>>> )
>>> But when I try to run the example with my points and the protein I
>>> always get an error.
>>> Can sombody help me, or tell me what I do wrong??
>>>
>>> Thanks in advance,
>>> Björn
>>>
>>>
>>>
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>>
>>
>
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The only unified storage solution that offers unified management
Up to 160% more powerful than alternatives and 25% more efficient.
Guaranteed. http://p.sf.net/sfu/emc-vnx-dev2dev
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