ZHOU.Jun wrote:

I found that my ntp version is 3-5.93e which is before 4.2.6

That version is extremely obsolete (probably more than a decade, possibly as much as 15 years). It doesn't support leap second files. Very few people will be able to remember far enough back to answer your question, although I suspect the only way of setting the bits is by a leap second aware clock driver.

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