Whit, I ran the same command on my Jaunty system and got the following:
mrut...@yorick ~/D/R_Stuff> R CMD config JAVA_CPPFLAGS -I/usr/lib/jvm/java-6-openjdk/jre/../include A quick check of my java related packages: ca-certificates-java install java-common install libaccess-bridge-java install sun-java6-bin install sun-java6-jre install tzdata-java install Maybe this will help. Micheal On Sun, May 3, 2009 at 7:52 PM, Whit Armstrong <armstrong.w...@gmail.com> wrote: > This is happening to me with R 2.9 and 2.8 on jaunty. > > w...@spartan:~$ R CMD config JAVA_CPPFLAGS > ~autodetect~ > w...@spartan:~$ > > > I can see the "~autodetect~" strings here: > https://svn.r-project.org/R/trunk/m4/java.m4 > > but JAVA_LIBS ends up being the correct value in my installation: > > w...@spartan:~/dvl/R.packages$ R CMD config JAVA_LIBS > -L/usr/lib/jvm/java-6-openjdk/jre/lib/amd64/server > -L/usr/lib/jvm/java-6-openjdk/jre/lib/amd64 > -L/usr/lib/jvm/java-6-openjdk/jre/../lib/amd64 -L/usr/local/lib64 > -L/usr/java/packages/lib/amd64 -L/usr/lib64 -L/lib64 -L/lib -L/usr/lib > -ljvm > w...@spartan:~/dvl/R.packages$ R CMD config JAVA_CPPFLAGS > ~autodetect~ > w...@spartan:~/dvl/R.packages$ > > -Whit > > _______________________________________________ > R-SIG-Debian mailing list > R-SIG-Debian@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-debian > -- Dr. Michael A. Rutter School of Science Penn State Erie, The Behrend College Station Road Erie, PA 16563 http://math.bd.psu.edu/faculty/rutter _______________________________________________ R-SIG-Debian mailing list R-SIG-Debian@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-debian
