On Thu, May 27, 2010 at 8:24 AM, Dirk Eddelbuettel <e...@debian.org> wrote: >
> > Ack, and my bad -- I should have checked. > > The packaging is much smarter than I gave it credit for and _does_ of course I'm running Ubuntu on 64bits at the moment and had no trouble building the newer jags with Dirk's setup from the previous version of jags. The new jags was not yet available in the package system on Friday, I don't think it is updated yet for Ubuntu. In case it saves you some trouble, I've uploaded the package and the Debian build stuff here: http://pj.freefaculty.org/Ubuntu/10.04/amd64/jags/ And the package itself is here: http://pj.freefaculty.org/Ubuntu/10.04/amd64/jags/jags_2.1.0-1_amd64.deb My package signing key is here, in case you are security conscious. http://pj.freefaculty.org/Ubuntu I am sorry this is not apt-get able. I'm not in that frame of mind. I'm really more of an RPM packager than a DEB builder. After installing that, there is joy and happiness in rjags land, as you see here. > install.packages("rjags",dep=T) Warning in install.packages("rjags", dep = T) : argument 'lib' is missing: using '/home/pauljohn/R/x86_64-pc-linux-gnu-library/2.11' --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done trying URL 'http://cran.wustl.edu/src/contrib/rjags_2.1.0-4.tar.gz' Content type 'application/x-tar' length 57357 bytes (56 Kb) opened URL ================================================== downloaded 56 Kb * installing *source* package ‘rjags’ ... checking for prefix by checking for jags... /usr/bin/jags checking for g++... g++ checking for C++ compiler default output file name... a.out checking whether the C++ compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking how to run the C++ preprocessor... g++ -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking Console.h usability... yes checking Console.h presence... yes checking for Console.h... yes checking for gcc... gcc checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking for jags_version in -ljags... yes configure: creating ./config.status config.status: creating src/Makevars configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/unix/zzz.R ** libs g++ -I/usr/share/R/include -I/usr/include/JAGS -fpic -g -O2 -c jags.cc -o jags.o g++ -shared -o rjags.so jags.o -L/usr/lib -ljags -L/usr/lib64/R/lib -lR installing to /home/pauljohn/R/x86_64-pc-linux-gnu-library/2.11/rjags/libs ** R ** preparing package for lazy loading Loading required package: lattice ** help *** installing help indices ** building package indices ... ** testing if installed package can be loaded module basemod loaded module bugs loaded * DONE (rjags) The downloaded packages are in ‘/tmp/Rtmp1WTF1H/downloaded_packages’ > -- Paul E. Johnson Professor, Political Science 1541 Lilac Lane, Room 504 University of Kansas _______________________________________________ R-SIG-Debian mailing list R-SIG-Debian@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-debian
