Dear All,
I just tried building the latest RDKit build (rev. 5204) from the github
repository, and hit a lot of link errors... So (somewhat at random) I tried an
older build (5042), and saw very similar things (errors for this attempt are
below).
I am running on 64-bit Windows, and use cmake and Visual Studio 2012 - my build
process hasn't changed since the last time I successfully built (rev. 4274 -
and I can confirm that if I roll-back to this revision, the build is once again
successful), so I wondered if anyone more skilled in the art than me could
suggest what the problem might be from the errors below(?)
These are the errors when building the 'ALL_BUILD' project:
Error 2651 error LNK2005: "public: virtual __cdecl
boost::detail::thread_data_base::~thread_data_base(void)"
(??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2652 error LNK2005: "public: void __cdecl
boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2653 error LNK2005: "class boost::thread::id __cdecl
boost::this_thread::get_id(void)"
(?get_id@this_thread@boost@@YA?AVid@thread@2@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2654 error LNK2005: "public: class boost::thread::id __cdecl
boost::thread::get_id(void)const " (?get_id@thread@boost@@QEBA?AVid@12@XZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2656 error LNK2005: "private: bool __cdecl
boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2658 error LNK2005: "public: bool __cdecl
boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ) already
defined in boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2659 error LNK2005: "private: bool __cdecl
boost::thread::start_thread_noexcept(void)"
(?start_thread_noexcept@thread@boost@@AEAA_NXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2660 error LNK1169: one or more multiply defined symbols found
C:\RDKit\build\rdkit\Chem\Release\rdDistGeom.pyd rdDistGeom
Error 2675 error LNK2005: "public: virtual __cdecl
boost::detail::thread_data_base::~thread_data_base(void)"
(??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2676 error LNK2005: "public: void __cdecl
boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2677 error LNK2005: "class boost::thread::id __cdecl
boost::this_thread::get_id(void)"
(?get_id@this_thread@boost@@YA?AVid@thread@2@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2678 error LNK2005: "public: class boost::thread::id __cdecl
boost::thread::get_id(void)const " (?get_id@thread@boost@@QEBA?AVid@12@XZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2679 error LNK2005: "private: bool __cdecl
boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2680 error LNK2005: "public: bool __cdecl
boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ) already
defined in boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2681 error LNK2005: "private: bool __cdecl
boost::thread::start_thread_noexcept(void)"
(?start_thread_noexcept@thread@boost@@AEAA_NXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2682 error LNK1169: one or more multiply defined symbols found
C:\RDKit\build\rdkit\Chem\Release\rdForceFieldHelpers.pyd 1
1 rdForceFieldHelpers
Error 2730 error LNK2005: "public: virtual __cdecl
boost::detail::thread_data_base::~thread_data_base(void)"
(??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2731 error LNK2005: "public: void __cdecl
boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2732 error LNK2005: "class boost::thread::id __cdecl
boost::this_thread::get_id(void)"
(?get_id@this_thread@boost@@YA?AVid@thread@2@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2733 error LNK2005: "public: class boost::thread::id __cdecl
boost::thread::get_id(void)const " (?get_id@thread@boost@@QEBA?AVid@12@XZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2734 error LNK2005: "private: bool __cdecl
boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2735 error LNK2005: "public: bool __cdecl
boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ) already
defined in boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2736 error LNK2005: "private: bool __cdecl
boost::thread::start_thread_noexcept(void)"
(?start_thread_noexcept@thread@boost@@AEAA_NXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2737 error LNK1169: one or more multiply defined symbols found
C:\RDKit\build\rdkit\Chem\Release\rdMolAlign.pyd rdMolAlign
Kind regards
James
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