Hi Greg – thanks!
One extra piece: as of a few minutes ago, I can confirm that revision 4947
(last revision in Feb) builds, and passes all of the tests.
Kind regards
James
From: Greg Landrum [mailto:greg.land...@gmail.com]
Sent: 08 April 2015 15:14
To: James Davidson
Cc: rdkit-discuss@lists.sourceforge.net
Subject: Re: [Rdkit-discuss] Problem building recent revisions on Windows
I will fire up windows tomorrow morning and ensure that things can build. It's
been a couple weeks since I last did that.
-greg
On Wed, Apr 8, 2015 at 3:43 PM, James Davidson
<j.david...@vernalis.com<mailto:j.david...@vernalis.com>> wrote:
Dear All,
I just tried building the latest RDKit build (rev. 5204) from the github
repository, and hit a lot of link errors… So (somewhat at random) I tried an
older build (5042), and saw very similar things (errors for this attempt are
below).
I am running on 64-bit Windows, and use cmake and Visual Studio 2012 – my build
process hasn’t changed since the last time I successfully built (rev. 4274 –
and I can confirm that if I roll-back to this revision, the build is once again
successful), so I wondered if anyone more skilled in the art than me could
suggest what the problem might be from the errors below(?)
These are the errors when building the ‘ALL_BUILD’ project:
Error 2651 error LNK2005: "public: virtual __cdecl
boost::detail::thread_data_base::~thread_data_base(void)"
(??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2652 error LNK2005: "public: void __cdecl
boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2653 error LNK2005: "class boost::thread::id __cdecl
boost::this_thread::get_id(void)"
(?get_id@this_thread@boost@@YA?AVid@thread@2@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2654 error LNK2005: "public: class boost::thread::id __cdecl
boost::thread::get_id(void)const " (?get_id@thread@boost@@QEBA?AVid@12@XZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2656 error LNK2005: "private: bool __cdecl
boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2658 error LNK2005: "public: bool __cdecl
boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ) already
defined in boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2659 error LNK2005: "private: bool __cdecl
boost::thread::start_thread_noexcept(void)"
(?start_thread_noexcept@thread@boost@@AEAA_NXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdDistGeom
Error 2660 error LNK1169: one or more multiply defined symbols found
C:\RDKit\build\rdkit\Chem\Release\rdDistGeom.pyd rdDistGeom
Error 2675 error LNK2005: "public: virtual __cdecl
boost::detail::thread_data_base::~thread_data_base(void)"
(??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2676 error LNK2005: "public: void __cdecl
boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2677 error LNK2005: "class boost::thread::id __cdecl
boost::this_thread::get_id(void)"
(?get_id@this_thread@boost@@YA?AVid@thread@2@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2678 error LNK2005: "public: class boost::thread::id __cdecl
boost::thread::get_id(void)const " (?get_id@thread@boost@@QEBA?AVid@12@XZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2679 error LNK2005: "private: bool __cdecl
boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2680 error LNK2005: "public: bool __cdecl
boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ) already
defined in boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2681 error LNK2005: "private: bool __cdecl
boost::thread::start_thread_noexcept(void)"
(?start_thread_noexcept@thread@boost@@AEAA_NXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdForceFieldHelpers
Error 2682 error LNK1169: one or more multiply defined symbols found
C:\RDKit\build\rdkit\Chem\Release\rdForceFieldHelpers.pyd 1
1 rdForceFieldHelpers
Error 2730 error LNK2005: "public: virtual __cdecl
boost::detail::thread_data_base::~thread_data_base(void)"
(??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2731 error LNK2005: "public: void __cdecl
boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2732 error LNK2005: "class boost::thread::id __cdecl
boost::this_thread::get_id(void)"
(?get_id@this_thread@boost@@YA?AVid@thread@2@XZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2733 error LNK2005: "public: class boost::thread::id __cdecl
boost::thread::get_id(void)const " (?get_id@thread@boost@@QEBA?AVid@12@XZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2734 error LNK2005: "private: bool __cdecl
boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2735 error LNK2005: "public: bool __cdecl
boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ) already
defined in boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2736 error LNK2005: "private: bool __cdecl
boost::thread::start_thread_noexcept(void)"
(?start_thread_noexcept@thread@boost@@AEAA_NXZ) already defined in
boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
rdMolAlign
Error 2737 error LNK1169: one or more multiply defined symbols found
C:\RDKit\build\rdkit\Chem\Release\rdMolAlign.pyd rdMolAlign
Kind regards
James
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If verification of this email is sought then please request a hard copy. Unless
otherwise stated, any views or opinions presented are solely those of the
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Wharfedale Road
Winnersh, Berkshire
RG41 5RD, England
Tel: +44 (0)118 938 0000
To access trading company registration and address details, please go to the
Vernalis website at www.vernalis.com and click on the "Company address and
registration details" link at the bottom of the page..
______________________________________________________________________
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