I will fire up windows tomorrow morning and ensure that things can build.
It's been a couple weeks since I last did that.
-greg
On Wed, Apr 8, 2015 at 3:43 PM, James Davidson <j.david...@vernalis.com>
wrote:
> Dear All,
>
>
>
> I just tried building the latest RDKit build (rev. 5204) from the github
> repository, and hit a lot of link errors… So (somewhat at random) I tried
> an older build (5042), and saw very similar things (errors for this attempt
> are below).
>
> I am running on 64-bit Windows, and use cmake and Visual Studio 2012 – my
> build process hasn’t changed since the last time I successfully built (rev.
> 4274 – and I can confirm that if I roll-back to this revision, the build is
> once again successful), so I wondered if anyone more skilled in the art
> than me could suggest what the problem might be from the errors below(?)
>
>
>
>
>
> These are the errors when building the ‘ALL_BUILD’ project:
>
>
>
> Error 2651 error LNK2005: "public: virtual __cdecl
> boost::detail::thread_data_base::~thread_data_base(void)"
> (??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdDistGeom
>
> Error 2652 error LNK2005: "public: void __cdecl
> boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already
> defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdDistGeom
>
> Error 2653 error LNK2005: "class boost::thread::id __cdecl
> boost::this_thread::get_id(void)" (?get_id@this_thread@boost@
> @YA?AVid@thread@2@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdDistGeom
>
> Error 2654 error LNK2005: "public: class boost::thread::id
> __cdecl boost::thread::get_id(void)const " (?get_id@thread@boost@
> @QEBA?AVid@12@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdDistGeom
>
> Error 2656 error LNK2005: "private: bool __cdecl
> boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
> already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdDistGeom
>
> Error 2658 error LNK2005: "public: bool __cdecl
> boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ)
> already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdDistGeom
>
> Error 2659 error LNK2005: "private: bool __cdecl
> boost::thread::start_thread_noexcept(void)" (?start_thread_noexcept@thread
> @boost@@AEAA_NXZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\DistGeomHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdDistGeom
>
> Error 2660 error LNK1169: one or more multiply defined symbols
> found C:\RDKit\build\rdkit\Chem\Release\rdDistGeom.pyd
> rdDistGeom
>
> Error 2675 error LNK2005: "public: virtual __cdecl
> boost::detail::thread_data_base::~thread_data_base(void)"
> (??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdForceFieldHelpers
>
> Error 2676 error LNK2005: "public: void __cdecl
> boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already
> defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdForceFieldHelpers
>
> Error 2677 error LNK2005: "class boost::thread::id __cdecl
> boost::this_thread::get_id(void)" (?get_id@this_thread@boost@
> @YA?AVid@thread@2@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdForceFieldHelpers
>
> Error 2678 error LNK2005: "public: class boost::thread::id
> __cdecl boost::thread::get_id(void)const " (?get_id@thread@boost@
> @QEBA?AVid@12@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdForceFieldHelpers
>
> Error 2679 error LNK2005: "private: bool __cdecl
> boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
> already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdForceFieldHelpers
>
> Error 2680 error LNK2005: "public: bool __cdecl
> boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ)
> already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdForceFieldHelpers
>
> Error 2681 error LNK2005: "private: bool __cdecl
> boost::thread::start_thread_noexcept(void)" (?start_thread_noexcept@thread
> @boost@@AEAA_NXZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\ForceFieldHelpers\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdForceFieldHelpers
>
> Error 2682 error LNK1169: one or more multiply defined symbols
> found
> C:\RDKit\build\rdkit\Chem\Release\rdForceFieldHelpers.pyd 1
> 1 rdForceFieldHelpers
>
> Error 2730 error LNK2005: "public: virtual __cdecl
> boost::detail::thread_data_base::~thread_data_base(void)"
> (??1thread_data_base@detail@boost@@UEAA@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdMolAlign
>
> Error 2731 error LNK2005: "public: void __cdecl
> boost::thread::detach(void)" (?detach@thread@boost@@QEAAXXZ) already
> defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdMolAlign
>
> Error 2732 error LNK2005: "class boost::thread::id __cdecl
> boost::this_thread::get_id(void)" (?get_id@this_thread@boost@
> @YA?AVid@thread@2@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdMolAlign
>
> Error 2733 error LNK2005: "public: class boost::thread::id
> __cdecl boost::thread::get_id(void)const " (?get_id@thread@boost@
> @QEBA?AVid@12@XZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdMolAlign
>
> Error 2734 error LNK2005: "private: bool __cdecl
> boost::thread::join_noexcept(void)" (?join_noexcept@thread@boost@@AEAA_NXZ)
> already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdMolAlign
>
> Error 2735 error LNK2005: "public: bool __cdecl
> boost::thread::joinable(void)const " (?joinable@thread@boost@@QEBA_NXZ)
> already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdMolAlign
>
> Error 2736 error LNK2005: "private: bool __cdecl
> boost::thread::start_thread_noexcept(void)" (?start_thread_noexcept@thread
> @boost@@AEAA_NXZ) already defined in
> boost_thread-vc110-mt-1_55.lib(boost_thread-vc110-mt-1_55.dll)
> C:\RDKit\build\Code\GraphMol\MolAlign\Wrap\libboost_thread-vc110-mt-1_55.lib(thread.obj)
> rdMolAlign
>
> Error 2737 error LNK1169: one or more multiply defined symbols
> found C:\RDKit\build\rdkit\Chem\Release\rdMolAlign.pyd
> rdMolAlign
>
>
>
>
>
> Kind regards
>
>
>
> James
>
> ______________________________________________________________________
> PLEASE READ: This email is confidential and may be privileged. It is
> intended for the named addressee(s) only and access to it by anyone else is
> unauthorised. If you are not an addressee, any disclosure or copying of the
> contents of this email or any action taken (or not taken) in reliance on it
> is unauthorised and may be unlawful. If you have received this email in
> error, please notify the sender or postmas...@vernalis.com. Email is not
> a secure method of communication and the Company cannot accept
> responsibility for the accuracy or completeness of this message or any
> attachment(s). Please check this email for virus infection for which the
> Company accepts no responsibility. If verification of this email is sought
> then please request a hard copy. Unless otherwise stated, any views or
> opinions presented are solely those of the author and do not represent
> those of the Company.
>
> The Vernalis Group of Companies
> 100 Berkshire Place
> Wharfedale Road
> Winnersh, Berkshire
> RG41 5RD, England
> Tel: +44 (0)118 938 0000
>
> To access trading company registration and address details, please go to
> the Vernalis website at www.vernalis.com and click on the "Company
> address and registration details" link at the bottom of the page..
> ______________________________________________________________________
>
>
> ------------------------------------------------------------------------------
> BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT
> Develop your own process in accordance with the BPMN 2 standard
> Learn Process modeling best practices with Bonita BPM through live
> exercises
> http://www.bonitasoft.com/be-part-of-it/events/bpm-camp-virtual-
> event?utm_
> source=Sourceforge_BPM_Camp_5_6_15&utm_medium=email&utm_campaign=VA_SF
> _______________________________________________
> Rdkit-discuss mailing list
> Rdkit-discuss@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
>
>
------------------------------------------------------------------------------
BPM Camp - Free Virtual Workshop May 6th at 10am PDT/1PM EDT
Develop your own process in accordance with the BPMN 2 standard
Learn Process modeling best practices with Bonita BPM through live exercises
http://www.bonitasoft.com/be-part-of-it/events/bpm-camp-virtual- event?utm_
source=Sourceforge_BPM_Camp_5_6_15&utm_medium=email&utm_campaign=VA_SF
_______________________________________________
Rdkit-discuss mailing list
Rdkit-discuss@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
