Hi,
I just installed relax on a Mac using fink.
relax-py26 1.3.4-2 Protein dynamics by NMR relax. data analysis
I also installed the dependencies using fink.
minfx-py26 1.0.2-1 The minfx optimisation library
numpy-py26 [virtual package]
python26 1:2.6.4-101 Interpreted, object-oriented language
scientificpython-py26 2.8-1 Python modules for scientific
computing
scons 0.98.3-1 Python-based build tool
I created a link in the relax directory pointing to the minfx directory:
minfx@ -> /sw/lib/python2.6/site-packages/minfx/
I compiled the relaxation curve fitting modules using scons but got the
following deprecation warnings:
========
scons: Reading SConscript files ...
/sw/lib/scons-0.98.3/SCons/Platform/posix.py:38: DeprecationWarning: The
popen2 module is deprecated. Use the subprocess module.
import popen2
/sw/lib/scons-0.98.3/SCons/Tool/msvs.py:37: DeprecationWarning: the md5
module is deprecated; use hashlib instead
========
After, I launched relax but got the following warning:
========
ImportError: dlopen(/sw/lib/relax-py26/maths_fns/relax_fit.so, 2): no
suitable image found. Did find:
/sw/lib/relax-py26/maths_fns/relax_fit.so: mach-o, but wrong
architecture
Relaxation curve fitting is unavailable, try compiling the C modules.
========
Concerning the test-suite, there were nultiple errors:
System tests
4 failures + 20 errors
Unit tests
12 errors
The unit tests errors were all the same:
======
Traceback (most recent call last):
File
"/sw/lib/relax-py26/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py",
line 54, in setUp
self.data = Scientific_data()
File "/sw/lib/relax-py26/generic_fns/structure/scientific.py", line
60, in __init__
raise RelaxError, "The Scientific python PDB module
Scientific.IO.PDB could not be imported."
RelaxError: RelaxError: The Scientific python PDB module
Scientific.IO.PDB could not be imported.
======
...
I guess all these errors are not normal...
Any idea to help me debug this issue ?
Thank you !!!
Séb
--
Sébastien Morin
PhD Student
S. Gagné NMR Laboratory
Université Laval& PROTEO
Québec, Canada
_______________________________________________
relax (http://nmr-relax.com)
This is the relax-users mailing list
relax-users@gna.org
To unsubscribe from this list, get a password
reminder, or change your subscription options,
visit the list information page at
https://mail.gna.org/listinfo/relax-users
