Answered on the StackOverflow page.
Best, L.
On 11/12/2013 05:42 PM, Horea Christian wrote:
Hi! I'm trying to test the deviance for a set of linear models
obtained from lme4::lmer() via RPy. As you can see in this notebook
http://nbviewer.ipython.org/urls/gist.github.com/TheChymera/7396334/raw/20c7878456fea4c05e1889d566ab1e5b20bc90bb/nlme-aov
that fails. It works perfectly in R though, and it works both in R and
RPy for stats::lm() instead of lme4::lmer() (you can see the
successful output for that in this thread on stackoverflow
http://stackoverflow.com/questions/19928662/call-anova-on-lme4-lmer-output-via-rpy
).
So this seems to be some collision of RPy with lme4 specifically. I
cannot figure out anything more precisely since both RPy and lme4 seem
to work fine independently.
Could you help me out?
Cheers,
--
Horea Christian
http://chymera.eu
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