Hi. Yes, i am. Could you just run this simple script in empty directory: #!/bin/sh wget https://sourceforge.net/projects/itk/files/itk/4.13/InsightToolkit-4.13.1.tar.gz tar -xvzf InsightToolkit-4.13.1.tar.gz mkdir InsightToolkit-4.13.1/build && cd InsightToolkit-4.13.1/build cmake -D CMAKE_BUILD_TYPE=Release -D BUILD_SHARED_LIBS:BOOL=ON .. && make -j`grep -c processor /proc/cpuinfo` ITK_DIR=`pwd` cd ../../ git clone https://github.com/SimonRit/RTK mkdir RTK/build && cd RTK/build cmake -D CMAKE_BUILD_TYPE=Release -D BUILD_SHARED_LIBS:BOOL=ON -D BUILD_TESTING:BOOL=OFF -D ITK_DIR:PATH=$ITK_DIR .. && make
Don't you have the same linker errors i wrote in the previous message ? some info about my system Ubuntu 17.04 Linux mnolro6001 4.10.0-42-generic #46-Ubuntu SMP Mon Dec 4 14:38:01 UTC 2017 x86_64 x86_64 x86_64 GNU/Linux gcc version 6.3.0 20170406 (Ubuntu 6.3.0-12ubuntu2) cmake version 3.13.0-rc1 On Fri, Oct 26, 2018 at 8:05 PM Simon Rit <[email protected]> wrote: > Hi, > Are you sure it's shared with the same compilation mode (Debug or Release) > ? > Simon > > On Fri, Oct 26, 2018 at 5:18 AM Julia Semyakishkina < > [email protected]> wrote: > >> Ok, it works in case ITK Static -> RTK Static. When i try to build ITK >> Shared -> RTK Shared, i have got: >> [ 19%] Linking CXX executable ../../bin/rtkamsterdamshroud >> CMakeFiles/rtkamsterdamshroud.dir/rtkamsterdamshroud.cxx.o: In function >> `rtk::ThreeDCircularProjectionGeometryXMLFileReader::New()': >> rtkamsterdamshroud.cxx:(.text._ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv[_ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv]+0xe): >> undefined reference to `typeinfo for >> rtk::ThreeDCircularProjectionGeometryXMLFileReader' >> rtkamsterdamshroud.cxx:(.text._ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv[_ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv]+0x41): >> undefined reference to `typeinfo for >> rtk::ThreeDCircularProjectionGeometryXMLFileReader' >> rtkamsterdamshroud.cxx:(.text._ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv[_ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv]+0xc9): >> undefined reference to >> `rtk::ThreeDCircularProjectionGeometryXMLFileReader::ThreeDCircularProjectionGeometryXMLFileReader()' >> CMakeFiles/rtkamsterdamshroud.dir/rtkamsterdamshroud.cxx.o: In function >> `std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, >> std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, >> std::char_traits<char>, std::allocator<char> > > > const >> rtk::GetProjectionsFileNamesFromGgo<args_info_rtkamsterdamshroud>(args_info_rtkamsterdamshroud >> const&)': >> rtkamsterdamshroud.cxx:(.text._ZN3rtk30GetProjectionsFileNamesFromGgoI28args_info_rtkamsterdamshroudEEKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS8_EERKT_[_ZN3rtk30GetProjectionsFileNamesFromGgoI28args_info_rtkamsterdamshroudEEKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS8_EERKT_]+0x3c1): >> undefined reference to `rtk::RegisterIOFactories()' >> CMakeFiles/rtkamsterdamshroud.dir/rtkamsterdamshroud.cxx.o: In function >> `rtk::ProjectionsReader<itk::Image<double, 3u> >> >::GenerateOutputInformation()': >> rtkamsterdamshroud.cxx:(.text._ZN3rtk17ProjectionsReaderIN3itk5ImageIdLj3EEEE25GenerateOutputInformationEv[_ZN3rtk17ProjectionsReaderIN3itk5ImageIdLj3EEEE25GenerateOutputInformationEv]+0x8e1): >> undefined reference to `rtk::RegisterIOFactories()' >> collect2: error: ld returned 1 exit status >> applications/rtkamsterdamshroud/CMakeFiles/rtkamsterdamshroud.dir/build.make:141: >> recipe for target 'bin/rtkamsterdamshroud' failed >> make[2]: *** [bin/rtkamsterdamshroud] Error 1 >> CMakeFiles/Makefile2:512: recipe for target >> 'applications/rtkamsterdamshroud/CMakeFiles/rtkamsterdamshroud.dir/all' >> failed >> make[1]: *** >> [applications/rtkamsterdamshroud/CMakeFiles/rtkamsterdamshroud.dir/all] >> Error 2 >> Makefile:129: recipe for target 'all' failed >> make: *** [all] Error 2 >> >> On Fri, Oct 26, 2018 at 2:59 AM Simon Rit <[email protected]> >> wrote: >> >>> Hi, >>> It seems that you are trying to compile against an installed ITK_DIR. >>> This is no longer possible, see this thread: >>> https://github.com/SimonRit/RTK/issues/207 >>> Can you try to compile against your build directory (set ITK_DIR to the >>> build directory)? >>> Thanks, >>> Simon >>> >>> On Thu, Oct 25, 2018 at 5:16 PM Julia Semyakishkina < >>> [email protected]> wrote: >>> >>>> Hello. >>>> I can't build RTK in Linux. I've done all default steps described in >>>> wiki, but on configure i've got: >>>> CMake Error at utilities/lp_solve/CMakeLists.txt:9 (include): >>>> include could not find load file: >>>> >>>> ITKModuleMacros >>>> >>>> >>>> Hm.. it tries include module that exists in src ITK dir, not install... >>>> I mean >>>> "ls /usr/local/lib/cmake/ITK-4.13 | grep ITKModuleMacros" prints nothing >>>> "ls /home/user/src/ITK/CMake | grep ITKModuleMacros" prints >>>> ITKModuleMacros.cmake >>>> >>>> OK, i have just tried to add CMAKE_MODULE_PATH=/home/user/src/ITK/CMake >>>> and got next error: >>>> >>>> CMake Error at CMakeLists.txt:250 (message): >>>> Modules can only be built against an ITK build tree; they cannot be >>>> built >>>> against an ITK install tree. >>>> >>>> Let's look at the code: >>>> >>>> if(NOT ITK_SOURCE_DIR) >>>> if(NOT EXISTS ${ITK_CMAKE_DIR}/ITKModuleMacros.cmake) >>>> message(FATAL_ERROR "Modules can only be built against an ITK build >>>> tree; they cannot be built against an ITK install tree.") >>>> endif() >>>> list(APPEND CMAKE_MODULE_PATH ${ITK_CMAKE_DIR}) >>>> include(ITKModuleExternal) >>>> else() >>>> itk_module_impl() >>>> endif() >>>> >>>> Yea, ITK_SOURCE_DIR is not set in my case, but why there is must be >>>> ITKModuleMacros.cmake at my ITK_CMAKE_DIR dir that points to ITK >>>> installation dir ? >>>> >>>> If i set ITK_CMAKE_DIR to /home/user/src/ITK/CMake where >>>> ITKModuleMacros is, it resets back to ITK installation directory at >>>> # -------------------------------------------------------- >>>> # Find ITK (required) >>>> if(NOT ITK_SOURCE_DIR) >>>> find_package(ITK 4.12.0 REQUIRED) >>>> endif() >>>> >>>> >>>> So, the only way i see is to build inside ITK, but i am not familiar >>>> with this. Could anyone help me how to build RTK inside ITK. >>>> _______________________________________________ >>>> Rtk-users mailing list >>>> [email protected] >>>> https://public.kitware.com/mailman/listinfo/rtk-users >>>> >>> _______________________________________________ >> Rtk-users mailing list >> [email protected] >> https://public.kitware.com/mailman/listinfo/rtk-users >> >
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