Hi, I can reproduce the problem and I haven't found a solution yet. I'll let you know when I have a fix... Simon
On Sat, Oct 27, 2018 at 6:06 AM Julia Semyakishkina < [email protected]> wrote: > Hi. Yes, i am. > Could you just run this simple script in empty directory: > #!/bin/sh > wget > https://sourceforge.net/projects/itk/files/itk/4.13/InsightToolkit-4.13.1.tar.gz > tar -xvzf InsightToolkit-4.13.1.tar.gz > mkdir InsightToolkit-4.13.1/build && cd InsightToolkit-4.13.1/build > cmake -D CMAKE_BUILD_TYPE=Release -D BUILD_SHARED_LIBS:BOOL=ON .. && make > -j`grep -c processor /proc/cpuinfo` > ITK_DIR=`pwd` > cd ../../ > git clone https://github.com/SimonRit/RTK > mkdir RTK/build && cd RTK/build > cmake -D CMAKE_BUILD_TYPE=Release -D BUILD_SHARED_LIBS:BOOL=ON -D > BUILD_TESTING:BOOL=OFF -D ITK_DIR:PATH=$ITK_DIR .. && make > > Don't you have the same linker errors i wrote in the previous message ? > > some info about my system > Ubuntu 17.04 > Linux mnolro6001 4.10.0-42-generic #46-Ubuntu SMP Mon Dec 4 14:38:01 UTC > 2017 x86_64 x86_64 x86_64 GNU/Linux > gcc version 6.3.0 20170406 (Ubuntu 6.3.0-12ubuntu2) > cmake version 3.13.0-rc1 > > > > > On Fri, Oct 26, 2018 at 8:05 PM Simon Rit <[email protected]> > wrote: > >> Hi, >> Are you sure it's shared with the same compilation mode (Debug or >> Release) ? >> Simon >> >> On Fri, Oct 26, 2018 at 5:18 AM Julia Semyakishkina < >> [email protected]> wrote: >> >>> Ok, it works in case ITK Static -> RTK Static. When i try to build ITK >>> Shared -> RTK Shared, i have got: >>> [ 19%] Linking CXX executable ../../bin/rtkamsterdamshroud >>> CMakeFiles/rtkamsterdamshroud.dir/rtkamsterdamshroud.cxx.o: In function >>> `rtk::ThreeDCircularProjectionGeometryXMLFileReader::New()': >>> rtkamsterdamshroud.cxx:(.text._ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv[_ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv]+0xe): >>> undefined reference to `typeinfo for >>> rtk::ThreeDCircularProjectionGeometryXMLFileReader' >>> rtkamsterdamshroud.cxx:(.text._ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv[_ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv]+0x41): >>> undefined reference to `typeinfo for >>> rtk::ThreeDCircularProjectionGeometryXMLFileReader' >>> rtkamsterdamshroud.cxx:(.text._ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv[_ZN3rtk45ThreeDCircularProjectionGeometryXMLFileReader3NewEv]+0xc9): >>> undefined reference to >>> `rtk::ThreeDCircularProjectionGeometryXMLFileReader::ThreeDCircularProjectionGeometryXMLFileReader()' >>> CMakeFiles/rtkamsterdamshroud.dir/rtkamsterdamshroud.cxx.o: In function >>> `std::vector<std::__cxx11::basic_string<char, std::char_traits<char>, >>> std::allocator<char> >, std::allocator<std::__cxx11::basic_string<char, >>> std::char_traits<char>, std::allocator<char> > > > const >>> rtk::GetProjectionsFileNamesFromGgo<args_info_rtkamsterdamshroud>(args_info_rtkamsterdamshroud >>> const&)': >>> rtkamsterdamshroud.cxx:(.text._ZN3rtk30GetProjectionsFileNamesFromGgoI28args_info_rtkamsterdamshroudEEKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS8_EERKT_[_ZN3rtk30GetProjectionsFileNamesFromGgoI28args_info_rtkamsterdamshroudEEKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS8_EERKT_]+0x3c1): >>> undefined reference to `rtk::RegisterIOFactories()' >>> CMakeFiles/rtkamsterdamshroud.dir/rtkamsterdamshroud.cxx.o: In function >>> `rtk::ProjectionsReader<itk::Image<double, 3u> >>> >::GenerateOutputInformation()': >>> rtkamsterdamshroud.cxx:(.text._ZN3rtk17ProjectionsReaderIN3itk5ImageIdLj3EEEE25GenerateOutputInformationEv[_ZN3rtk17ProjectionsReaderIN3itk5ImageIdLj3EEEE25GenerateOutputInformationEv]+0x8e1): >>> undefined reference to `rtk::RegisterIOFactories()' >>> collect2: error: ld returned 1 exit status >>> applications/rtkamsterdamshroud/CMakeFiles/rtkamsterdamshroud.dir/build.make:141: >>> recipe for target 'bin/rtkamsterdamshroud' failed >>> make[2]: *** [bin/rtkamsterdamshroud] Error 1 >>> CMakeFiles/Makefile2:512: recipe for target >>> 'applications/rtkamsterdamshroud/CMakeFiles/rtkamsterdamshroud.dir/all' >>> failed >>> make[1]: *** >>> [applications/rtkamsterdamshroud/CMakeFiles/rtkamsterdamshroud.dir/all] >>> Error 2 >>> Makefile:129: recipe for target 'all' failed >>> make: *** [all] Error 2 >>> >>> On Fri, Oct 26, 2018 at 2:59 AM Simon Rit < >>> [email protected]> wrote: >>> >>>> Hi, >>>> It seems that you are trying to compile against an installed ITK_DIR. >>>> This is no longer possible, see this thread: >>>> https://github.com/SimonRit/RTK/issues/207 >>>> Can you try to compile against your build directory (set ITK_DIR to the >>>> build directory)? >>>> Thanks, >>>> Simon >>>> >>>> On Thu, Oct 25, 2018 at 5:16 PM Julia Semyakishkina < >>>> [email protected]> wrote: >>>> >>>>> Hello. >>>>> I can't build RTK in Linux. I've done all default steps described in >>>>> wiki, but on configure i've got: >>>>> CMake Error at utilities/lp_solve/CMakeLists.txt:9 (include): >>>>> include could not find load file: >>>>> >>>>> ITKModuleMacros >>>>> >>>>> >>>>> Hm.. it tries include module that exists in src ITK dir, not install... >>>>> I mean >>>>> "ls /usr/local/lib/cmake/ITK-4.13 | grep ITKModuleMacros" prints >>>>> nothing >>>>> "ls /home/user/src/ITK/CMake | grep ITKModuleMacros" prints >>>>> ITKModuleMacros.cmake >>>>> >>>>> OK, i have just tried to add >>>>> CMAKE_MODULE_PATH=/home/user/src/ITK/CMake and got next error: >>>>> >>>>> CMake Error at CMakeLists.txt:250 (message): >>>>> Modules can only be built against an ITK build tree; they cannot be >>>>> built >>>>> against an ITK install tree. >>>>> >>>>> Let's look at the code: >>>>> >>>>> if(NOT ITK_SOURCE_DIR) >>>>> if(NOT EXISTS ${ITK_CMAKE_DIR}/ITKModuleMacros.cmake) >>>>> message(FATAL_ERROR "Modules can only be built against an ITK >>>>> build tree; they cannot be built against an ITK install tree.") >>>>> endif() >>>>> list(APPEND CMAKE_MODULE_PATH ${ITK_CMAKE_DIR}) >>>>> include(ITKModuleExternal) >>>>> else() >>>>> itk_module_impl() >>>>> endif() >>>>> >>>>> Yea, ITK_SOURCE_DIR is not set in my case, but why there is must be >>>>> ITKModuleMacros.cmake at my ITK_CMAKE_DIR dir that points to ITK >>>>> installation dir ? >>>>> >>>>> If i set ITK_CMAKE_DIR to /home/user/src/ITK/CMake where >>>>> ITKModuleMacros is, it resets back to ITK installation directory at >>>>> # -------------------------------------------------------- >>>>> # Find ITK (required) >>>>> if(NOT ITK_SOURCE_DIR) >>>>> find_package(ITK 4.12.0 REQUIRED) >>>>> endif() >>>>> >>>>> >>>>> So, the only way i see is to build inside ITK, but i am not familiar >>>>> with this. Could anyone help me how to build RTK inside ITK. >>>>> _______________________________________________ >>>>> Rtk-users mailing list >>>>> [email protected] >>>>> https://public.kitware.com/mailman/listinfo/rtk-users >>>>> >>>> _______________________________________________ >>> Rtk-users mailing list >>> [email protected] >>> https://public.kitware.com/mailman/listinfo/rtk-users >>> >> _______________________________________________ > Rtk-users mailing list > [email protected] > https://public.kitware.com/mailman/listinfo/rtk-users >
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