Salut, it is still a pain, but thanks for your ideas anyway. There are several things going wrong, here is some system background and the (detailed) output.
Thanks, Christian ---------------------------------------- My system is Mac OS X 10.6.6 (10J567) and the version of the kernel is Darwin 10.6.0. The file I used for the disk image is sage-4.6.1-OSX-64bit-10.6-i386-Darwin.dmg meta 499.99 MB 2011-01-13 15:05 from http://content.wuala.com/contents/phatsphere/edoras/sage-mirror/osx/intel/index.html # ./sage -b main Detected SAGE64 flag Building Sage on OS X in 64-bit mode Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode ---------------------------------------------------------- sage: Building and installing modified Sage library files. Installing c_lib 64 bit mode scons: `install' is up to date. Updating Cython code.... Time to execute 0 commands: 1.78813934326e-05 seconds Finished compiling Cython code (time = 4.02820301056 seconds) running install running build running build_py running build_ext warning: Replacing library search directory in linker command: "/Users/buildbot/build/sage/bsd-1/bsd_64_binary/build/sage-4.6.1/ local/lib" -> "/Applications/sage/local/lib" Time to execute 0 commands: 1.28746032715e-05 seconds Total time spent compiling C/C++ extensions: 0.103187084198 seconds. running install_lib running install_egg_info Removing /Applications/sage/local/lib/python2.6/site-packages/ sage-0.0.0-py2.6.egg-info Writing /Applications/sage/local/lib/python2.6/site-packages/ sage-0.0.0-py2.6.egg-info real 0m7.478s user 0m1.285s sys 0m0.902s # rm -rf devel/sage-combinat # ./sage -combinat install Detected SAGE64 flag Building Sage on OS X in 64-bit mode Creating sage-combinat branch: /Applications/sage/sage -b main Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode ---------------------------------------------------------- sage: Building and installing modified Sage library files. Installing c_lib 64 bit mode scons: `install' is up to date. Updating Cython code.... Time to execute 0 commands: 1.78813934326e-05 seconds Finished compiling Cython code (time = 2.35413599014 seconds) running install running build running build_py running build_ext warning: Replacing library search directory in linker command: "/Users/buildbot/build/sage/bsd-1/bsd_64_binary/build/sage-4.6.1/ local/lib" -> "/Applications/sage/local/lib" Time to execute 0 commands: 1.31130218506e-05 seconds Total time spent compiling C/C++ extensions: 0.0594050884247 seconds. running install_lib running install_egg_info Removing /Applications/sage/local/lib/python2.6/site-packages/ sage-0.0.0-py2.6.egg-info Writing /Applications/sage/local/lib/python2.6/site-packages/ sage-0.0.0-py2.6.egg-info real 0m4.985s user 0m1.257s sys 0m0.795s /Applications/sage/sage -clone combinat Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode Now cloning the current Sage library branch... hg clone sage sage-combinat updating to branch default 2346 files updated, 0 files merged, 0 files removed, 0 files unresolved Copying over all Cython auto-generated .c, .cpp and .h files... Copying over build directory... Copying over all auto-generated reference manual .rst files... Copying over documentation output... Building sage-combinat... sage -b combinat Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode ---------------------------------------------------------- sage: Building and installing modified Sage library files. Installing c_lib 64 bit mode gcc -o src/convert.os -c -O2 -g -m64 -fPIC -I/Applications/sage/local/ include -I/Applications/sage/local/include/python2.6 -I/Applications/ sage/local/include/NTL -Iinclude src/convert.c gcc -o src/interrupt.os -c -O2 -g -m64 -fPIC -I/Applications/sage/ local/include -I/Applications/sage/local/include/python2.6 -I/ Applications/sage/local/include/NTL -Iinclude src/interrupt.c src/interrupt.c: In function ‘msg’: src/interrupt.c:140: warning: format not a string literal and no format arguments gcc -o src/mpn_pylong.os -c -O2 -g -m64 -fPIC -I/Applications/sage/ local/include -I/Applications/sage/local/include/python2.6 -I/ Applications/sage/local/include/NTL -Iinclude src/mpn_pylong.c gcc -o src/mpz_pylong.os -c -O2 -g -m64 -fPIC -I/Applications/sage/ local/include -I/Applications/sage/local/include/python2.6 -I/ Applications/sage/local/include/NTL -Iinclude src/mpz_pylong.c gcc -o src/mpz_longlong.os -c -O2 -g -m64 -fPIC -I/Applications/sage/ local/include -I/Applications/sage/local/include/python2.6 -I/ Applications/sage/local/include/NTL -Iinclude src/mpz_longlong.c gcc -o src/stdsage.os -c -O2 -g -m64 -fPIC -I/Applications/sage/local/ include -I/Applications/sage/local/include/python2.6 -I/Applications/ sage/local/include/NTL -Iinclude src/stdsage.c gcc -o src/gmp_globals.os -c -O2 -g -m64 -fPIC -I/Applications/sage/ local/include -I/Applications/sage/local/include/python2.6 -I/ Applications/sage/local/include/NTL -Iinclude src/gmp_globals.c g++ -o src/ZZ_pylong.os -c -O2 -g -m64 -fPIC -I/Applications/sage/ local/include -I/Applications/sage/local/include/python2.6 -I/ Applications/sage/local/include/NTL -Iinclude src/ZZ_pylong.cpp g++ -o src/ntl_wrap.os -c -O2 -g -m64 -fPIC -I/Applications/sage/local/ include -I/Applications/sage/local/include/python2.6 -I/Applications/ sage/local/include/NTL -Iinclude src/ntl_wrap.cpp g++ -o libcsage.dylib -m64 -single_module -flat_namespace -undefined dynamic_lookup -dynamiclib src/convert.os src/interrupt.os src/ mpn_pylong.os src/mpz_pylong.os src/mpz_longlong.os src/stdsage.os src/ gmp_globals.os src/ZZ_pylong.os src/ntl_wrap.os -L/Applications/sage/ local/lib -L/Applications/sage/local/lib/python/config -lntl -lgmp - lpari -lpython2.6 Building interpreters for fast_callable Updating Cython code.... Building sage/plot/plot3d/parametric_surface.pyx because it depends on sage/ext/interpreters/wrapper_rdf.pxd. Building modified file sage/ext/interpreters/wrapper_rdf.pyx. Building modified file sage/ext/interpreters/wrapper_cdf.pyx. Building modified file sage/ext/interpreters/wrapper_rr.pyx. Building modified file sage/ext/interpreters/wrapper_py.pyx. Building modified file sage/ext/interpreters/wrapper_el.pyx. python `which cython` --embed-positions --directive cdivision=True,autotestdict=False -I/Applications/sage/devel/sage- combinat -o sage/ext/interpreters/wrapper_rdf.c sage/ext/interpreters/ wrapper_rdf.pyx warning: /Applications/sage/devel/sage-combinat/sage/ext/interpreters/ wrapper_rdf.pxd:3:0: 'python_object' is deprecated, use 'cpython' sage/ext/interpreters/wrapper_rdf.pyx --> /Applications/sage/local// lib/python/site-packages//sage/ext/interpreters/wrapper_rdf.pyx python `which cython` --embed-positions --directive cdivision=True,autotestdict=False -I/Applications/sage/devel/sage- combinat -o sage/ext/interpreters/wrapper_cdf.c sage/ext/interpreters/ wrapper_cdf.pyx warning: /Applications/sage/devel/sage-combinat/sage/ext/interpreters/ wrapper_cdf.pxd:3:0: 'python_object' is deprecated, use 'cpython' sage/ext/interpreters/wrapper_cdf.pyx --> /Applications/sage/local// lib/python/site-packages//sage/ext/interpreters/wrapper_cdf.pyx python `which cython` --embed-positions --directive cdivision=True,autotestdict=False -I/Applications/sage/devel/sage- combinat -o sage/ext/interpreters/wrapper_rr.c sage/ext/interpreters/ wrapper_rr.pyx warning: /Applications/sage/devel/sage-combinat/sage/ext/interpreters/ wrapper_rr.pxd:3:0: 'python_object' is deprecated, use 'cpython' sage/ext/interpreters/wrapper_rr.pyx --> /Applications/sage/local//lib/ python/site-packages//sage/ext/interpreters/wrapper_rr.pyx python `which cython` --embed-positions --directive cdivision=True,autotestdict=False -I/Applications/sage/devel/sage- combinat -o sage/ext/interpreters/wrapper_py.c sage/ext/interpreters/ wrapper_py.pyx warning: /Applications/sage/devel/sage-combinat/sage/ext/interpreters/ wrapper_py.pxd:3:0: 'python_object' is deprecated, use 'cpython' sage/ext/interpreters/wrapper_py.pyx --> /Applications/sage/local//lib/ python/site-packages//sage/ext/interpreters/wrapper_py.pyx python `which cython` --embed-positions --directive cdivision=True,autotestdict=False -I/Applications/sage/devel/sage- combinat -o sage/ext/interpreters/wrapper_el.c sage/ext/interpreters/ wrapper_el.pyx warning: /Applications/sage/devel/sage-combinat/sage/ext/interpreters/ wrapper_el.pxd:3:0: 'python_object' is deprecated, use 'cpython' sage/ext/interpreters/wrapper_el.pyx --> /Applications/sage/local//lib/ python/site-packages//sage/ext/interpreters/wrapper_el.pyx python `which cython` --embed-positions --directive cdivision=True,autotestdict=False -I/Applications/sage/devel/sage- combinat -o sage/plot/plot3d/parametric_surface.c sage/plot/plot3d/ parametric_surface.pyx warning: /Applications/sage/devel/sage-combinat/sage/ext/interpreters/ wrapper_rdf.pxd:3:0: 'python_object' is deprecated, use 'cpython' sage/plot/plot3d/parametric_surface.pyx --> /Applications/sage/local// lib/python/site-packages//sage/plot/plot3d/parametric_surface.pyx Time to execute 6 commands: 7.48618102074 seconds Finished compiling Cython code (time = 7.95324397087 seconds) running install running build running build_py running build_ext warning: Replacing library search directory in linker command: "/Users/buildbot/build/sage/bsd-1/bsd_64_binary/build/sage-4.6.1/ local/lib" -> "/Applications/sage/local/lib" building 'sage.plot.plot3d.parametric_surface' extension building 'sage.ext.interpreters.wrapper_rdf' extension building 'sage.ext.interpreters.wrapper_cdf' extension building 'sage.ext.interpreters.wrapper_rr' extension building 'sage.ext.interpreters.wrapper_py' extension building 'sage.ext.interpreters.wrapper_el' extension gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/plot/plot3d/ parametric_surface.c -o build/temp.macosx-10.6-i386-2.6/sage/plot/ plot3d/parametric_surface.o -w gcc -m64 -L/Applications/sage/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.6-i386-2.6/sage/plot/plot3d/ parametric_surface.o -L/Applications/sage/local//lib -lcsage -lstdc++ - lntl -o build/lib.macosx-10.6-i386-2.6/sage/plot/plot3d/ parametric_surface.so gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ wrapper_rdf.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rdf.o -w gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ interp_rdf.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_rdf.o -w gcc -m64 -L/Applications/sage/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rdf.o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_rdf.o -L/Applications/sage/local//lib -lcsage -lgsl -lstdc++ - lntl -o build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rdf.so gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ wrapper_cdf.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_cdf.o -w gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ interp_cdf.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_cdf.o -w gcc -m64 -L/Applications/sage/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_cdf.o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_cdf.o -L/Applications/sage/local//lib -lcsage -lstdc++ -lntl -o build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/wrapper_cdf.so gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ wrapper_rr.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rr.o -w gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ interp_rr.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_rr.o -w gcc -m64 -L/Applications/sage/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rr.o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_rr.o -L/Applications/sage/local//lib -lcsage -lmpfr -lstdc++ - lntl -o build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rr.so gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ wrapper_py.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_py.o -w gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ interp_py.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_py.o -w gcc -m64 -L/Applications/sage/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_py.o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_py.o -L/Applications/sage/local//lib -lcsage -lstdc++ -lntl -o build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/wrapper_py.so gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ wrapper_el.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_el.o -w gcc -fno-strict-aliasing -g -O2 -DNDEBUG -g -O3 -m64 -Wall -Wstrict- prototypes -I/Applications/sage/local//include -I/Applications/sage/ local//include/csage -I/Applications/sage/devel//sage/sage/ext -I/ Applications/sage/local/include/python2.6 -c sage/ext/interpreters/ interp_el.c -o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_el.o -w gcc -m64 -L/Applications/sage/local/lib -bundle -undefined dynamic_lookup build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_el.o build/temp.macosx-10.6-i386-2.6/sage/ext/interpreters/ interp_el.o -L/Applications/sage/local//lib -lcsage -lstdc++ -lntl -o build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/wrapper_el.so Time to execute 6 commands: 21.3264410496 seconds Total time spent compiling C/C++ extensions: 21.3957538605 seconds. running install_lib copying build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_cdf.so -> /Applications/sage/local/lib/python2.6/site-packages/ sage/ext/interpreters copying build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_el.so -> /Applications/sage/local/lib/python2.6/site-packages/ sage/ext/interpreters copying build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_py.so -> /Applications/sage/local/lib/python2.6/site-packages/ sage/ext/interpreters copying build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rdf.so -> /Applications/sage/local/lib/python2.6/site-packages/ sage/ext/interpreters copying build/lib.macosx-10.6-i386-2.6/sage/ext/interpreters/ wrapper_rr.so -> /Applications/sage/local/lib/python2.6/site-packages/ sage/ext/interpreters copying build/lib.macosx-10.6-i386-2.6/sage/plot/plot3d/ parametric_surface.so -> /Applications/sage/local/lib/python2.6/site- packages/sage/plot/plot3d running install_egg_info Removing /Applications/sage/local/lib/python2.6/site-packages/ sage-0.0.0-py2.6.egg-info Writing /Applications/sage/local/lib/python2.6/site-packages/ sage-0.0.0-py2.6.egg-info real 0m37.186s user 0m28.119s sys 0m2.659s After cloning, if you change any Sage library files and want to rebuild the html version of the reference manual, use the command sage -docbuild --jsmath reference html (after running 'sage -b'). Note: if *before* cloning, you have changed any Sage library files without rebuilding the reference manual, then after cloning, you will need to touch those files again if you want the changes to be incorporated into the reference manual. Updating modification times for the documentation... sage -docbuild --jsmath --update-mtimes reference html Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode sphinx-build -b html -d /Applications/sage/devel/sage/doc/output/ doctrees/en/reference /Applications/sage/devel/sage/doc/en/ reference /Applications/sage/devel/sage/doc/output/html/en/reference Running Sphinx v1.0.4 loading pickled environment... done building [html]: targets for 0 source files that are out of date updating environment: 0 added, 811 changed, 0 removed reading sources... [100%] sagenb/storage/filesystem_storage looking for now-outdated files... none found pickling environment... done checking consistency... done preparing documents... done writing output... [100%] tensor writing additional files... genindex py-modindex search copying images... [100%] media/homology/torus_labelled.png copying static files... done dumping search index... done dumping object inventory... done build succeeded. Build finished. The built documents can be found in /Applications/ sage/devel/sage/doc/output/html/en/reference *** WARNING *** If you are cloning a previous revision or have uncommitted changes to cython files do sage -ba Otherwise Sage might build using the wrong .c files !! real 10m46.812s user 9m39.545s sys 0m20.491s Done Switching to sage combinat root directory: /Applications/sage/devel/ sage-combinat There are local changes; aborting Please qrefresh or discard your changes before proceeding Building Sage on OS X in 64-bit mode Creating SAGE_LOCAL/lib/sage-64.txt since it does not exist Detected SAGE64 flag Building Sage on OS X in 64-bit mode On Mar 1, 6:14 pm, "Nicolas M. Thiery" <nicolas.thi...@u-psud.fr> wrote: > On Tue, Mar 01, 2011 at 06:27:12AM -0800, Christian Stump wrote: > > He downloaded the 64bit version of sage, and then run > > > # ./sage -combinat install > > > it seems that rebuilding sage went well, but afterwards, hg detected > > "local changes" in devel/sage-combinat and stopped. Any suggestions? > > Hmm. Was the previous partial installation deleted before hand? > > > sage -b main > > rm -rf <SAGEROOT>/devel/sage-combinat > > There might possibly be scories there which could cause trouble ... > > Cheers, > Nicolas > -- > Nicolas M. Thi�ry "Isil" <nthi...@users.sf.net>http://Nicolas.Thiery.name/ -- You received this message because you are subscribed to the Google Groups "sage-combinat-devel" group. To post to this group, send email to sage-combinat-devel@googlegroups.com. To unsubscribe from this group, send email to sage-combinat-devel+unsubscr...@googlegroups.com. For more options, visit this group at http://groups.google.com/group/sage-combinat-devel?hl=en.
